Gene Mmc1_0178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_0178 
Symbol 
ID4481558 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp196232 
End bp197314 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content59% 
IMG OID639720923 
Producthypothetical protein 
Protein accessionYP_864111 
Protein GI117923494 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000828207 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCGCC CATCTTGGTA CAAATATGCG AGCTCCCTTA CTTCTCTACT CATTGCCACG 
TTGCTGATGG TACAACTTTG GAGCCGCTCG GAACAGCTCG AACCCATACC ATGGTTGCCC
CCTGAGGTTT CGCAAGAGGC TCAACCCAGC CTGCCGCTAC AAGTGGTCCA ACTACCAGCG
CCACCGGTGC AGACGGCAGC CACAGCCCAG CTGCCCACAC CAACCGCCGC GCCTACGCTG
CCGCAGCAGA GCACCGCCGC GCACCCTCCA ATGCCGCCCC TCAAGCCAGA GACAAACCCG
GTGGCCCATC CGCTCTTACC CACCGCCATG CTTAACCCCG TTACACCCGT ACAAACCATT
AAACCGCTCA AGCCCAGCCC GCTGGCCCCG CTGGAGGTTA CCGTACAAGC CATGCCGCAG
TCCTCACCCT CAGCAGCCCC TTTAGAGATA CCCGCTGAGG CACGGCACGC CTTAAAACCG
CACCCCAAGC CGGTCACGCA AGAGGCCATG CCGAGGGTTA CACCAGAAAC CACGCTACAA
CCGGCCAATC CCACCCCTCA ACCCACCGAG GTACAGGTTC AACAAGGGCG GGTGCTGCTT
AAACTGCTGG AGCACGGTAA AGGTCCCTCG ATAACCTTGC GCTGGCCCAA CCAACAGCGG
CAAACCCTCT ATCGACATAT GGTGCAGTGT CGGGGCATGC GCAGTGGTGT CATGGATGCT
CAACAGCACA TTTTTATGCC AGGGGGTACC CCTGGGGTGG CTTGGTCGAT TAATCGGGAT
CGTTACAGTG GGTTTATGCG CTTAACCAAT CAAGTGGAAA ACCAGGAACG CCTGCAACTT
CAGGAGATCC GCCATTACCA TGGGCTGGAG AGCGCCACCA CCCCCATACG GCTGTTTCCA
CGTCGCTTCG ATGCGGCGTT ACTCGGGGGT TTGCAACACT TGATTGGCCC GACCTACGGC
ACGGCGCGCA GCATTGAAGC CAACTATCGC TTGCAACAAG GCCGCTTATG GGTTGAGGCG
ATTAAGGTGG ATGGTGGGGC TGTAGCGGGT CAGATTGATT TGAACCTGCA CCCTTGTTTG
TAG
 
Protein sequence
MARPSWYKYA SSLTSLLIAT LLMVQLWSRS EQLEPIPWLP PEVSQEAQPS LPLQVVQLPA 
PPVQTAATAQ LPTPTAAPTL PQQSTAAHPP MPPLKPETNP VAHPLLPTAM LNPVTPVQTI
KPLKPSPLAP LEVTVQAMPQ SSPSAAPLEI PAEARHALKP HPKPVTQEAM PRVTPETTLQ
PANPTPQPTE VQVQQGRVLL KLLEHGKGPS ITLRWPNQQR QTLYRHMVQC RGMRSGVMDA
QQHIFMPGGT PGVAWSINRD RYSGFMRLTN QVENQERLQL QEIRHYHGLE SATTPIRLFP
RRFDAALLGG LQHLIGPTYG TARSIEANYR LQQGRLWVEA IKVDGGAVAG QIDLNLHPCL