| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0175 |
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| Symbol | |
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| ID | 4481555 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 192502 |
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| End bp | 193395 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639720920 |
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| Product | prephenate dehydrogenase |
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| Protein accession | YP_864108 |
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| Protein GI | 117923491 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0287] Prephenate dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000165 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGTTT TGATAAAGCG GCTGACCTTG ATTGGGGTTG GGTTGATTGG GGCATCTTTG
GCGCAGGCGT TACGCAAGCG TGATTTGGTG GGTGAGATTG TGGGGGTGGA TCGGCGTCGG
GCGTCGCTGG ATTATGCGTT GGAGCAGGGT ATTATTGATC GTGTTGAGAC GCATGCGGCG
CGGGGTGTTG AGGGGGCGAC GTTGGTATTG ATTGCGACAC CGGTTTCGAC GATTGTGTCG
ATGGTGGAGG ATTGTGTTGC GGGTTTGGGT AGGGGTGTGG TGGTTACGGA TGTGGGTTCG
GTGAAGGGGC GCATTGTGGA GCGGTGTGAG GCGTTGATGC CGGAGGGGTG TGCGTTTGTG
GGGGGGCATC CTATTGCGGG GCGGGAGCAT TCTGGGGTTG AGGCGGCGTT GGCATCGTTA
TTTGATGGGG CGCGAACGAT TTTGACACCG AGTTCGGTTA CGCCGCGTTG GGCGTTGGAG
TTGGTGACGG AGATGTGGGA GTCGGTGGGT GCGACGGTTG AGAGCATGGA GCCGCATTGG
CATGATCAGG TTTTGGCGGC GACGAGTCAT TTACCGCATT TGATGGCGTA TAATGTGGTG
AACACCTTAT CGGATTTGGA GGATCATTTA CGCACGGAGG TTTTTCGGTA TGCGGCGAGT
GGTTTTCGGG ATTTTACGCG CATTGCGTCG TCGGATCCGA CCATGTGGCG GGACATATGT
TTAGAGAACA AGGATGCGAT TCTTTCCATT TTGGGACGTT TTAAGAGTGA TTTGGAGAAG
TTGACCAAGC GGGTTGAGGA AGAGGATGCG GATGGATTGT ATGGTATATT TGCGCGTTCT
AAGGATACCC GTGCGAGGAT TTTGCAGGAG AACAAAATTT TGCGTGGGGA GTAG
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| Protein sequence | MSVLIKRLTL IGVGLIGASL AQALRKRDLV GEIVGVDRRR ASLDYALEQG IIDRVETHAA
RGVEGATLVL IATPVSTIVS MVEDCVAGLG RGVVVTDVGS VKGRIVERCE ALMPEGCAFV
GGHPIAGREH SGVEAALASL FDGARTILTP SSVTPRWALE LVTEMWESVG ATVESMEPHW
HDQVLAATSH LPHLMAYNVV NTLSDLEDHL RTEVFRYAAS GFRDFTRIAS SDPTMWRDIC
LENKDAILSI LGRFKSDLEK LTKRVEEEDA DGLYGIFARS KDTRARILQE NKILRGE
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