| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0172 |
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| Symbol | |
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| ID | 4481552 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 186895 |
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| End bp | 188607 |
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| Gene Length | 1713 bp |
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| Protein Length | 570 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639720917 |
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| Product | SSU ribosomal protein S1P |
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| Protein accession | YP_864105 |
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| Protein GI | 117923488 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0539] Ribosomal protein S1 |
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| TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0487527 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACTGACG ATCTAATTCT TGATGATATT GCCGATGAAG ATTTTGAAGC TCTGTTGGAA
GAGTCCTTCA GTAAAGGTGT GGGCCGTGAG GGCTCCGTCG TTACCGGGAC CATCATCCAG
CGGGAAGGTG ATGAGTTCAT CATCGATGTA GGCTTGAAGT CTGAAGGACG CCTCACGATC
CGTGAATTTT ATGATGCCGA TGGTCAGTTG ACCATTGGTG TGGGCGACAG TGTGGATGTG
TTTGTGGAGC GCTGCGAAGA CCAAAATGGT CTGGCTGTGC TGAGCCGTGA AAAAGCCAAA
CGCGAAGAGG CATGGGTGCT TCTGGAAGAG GCTTTCAACG ATGGCAAAAC CGTCGATGGT
CGCATCATGG GCAAGGTCAA GGGTGGTTAC ACCGTGGATC TGGGCGGTCT GGCCGCTTTC
CTACCTGGTT CCCAGGTGGA TGTGCGTCCC GTTCACGACA TCTCCCGTCT GCAAGAAGAG
ACCCAGCCTT TCGATATTCT CAAAATGGAT CGTCGTCGTG GCAATATTGT TGTCTCCCGT
CGTACCGTTA TCGAGAAGCA TCGTGAAAAT GCTCGCTCCG CACTGCTGGA GACACTGCAC
GAAGGTATGG TGCTCGACGG TATTGTTAAG AACATCACCG ACTACGGCGC GTTCGTGGAT
CTGGGTGGTC TTGACGGTCT GCTACACATC ACCGACATGT CCTGGAAACG TGTTAAACAT
CCTTCCGCCG TGGTCAATGT TGGCGATACC GTGACGGTGC AGGTTATCAA GTTTAATTCC
GACACGCAGC GTATCTCCCT GGGTATGAAG CAACTGCTGA TTGATCCCTG GGAAGGCATT
GGGGCCAAAT ATCCCGCCGG TGCCAAGTTT AGCGGTCATG TCACCAACAT CACCGATTAC
GGCTCGTTTG TTGAGCTGGA GCCCGGCGTT GAGGGTCTGG CCCACGTCTC TGAACTGACC
TGGACCAAGA AAAACATTCA CCCCTCCAAA ATTCTGGAAG TTAACCAGAT TGTTGAAGTG
ATGGTGCTGG ATGTGGACGC CGACCGTCGC CGTATCTCCC TGGGTATCAA ACAGTGCCAA
GAGAACCCCT GGGAAGCCTT TGCCACCAGC CACCCCGTGG GTGCCATGGT TAAAGGCGAG
ATCAAAAATA TCACCGAGTT TGGCCTGTTC GTGGGTCTGG AGGGTGACAT TGATGGTCTG
GTACACCTCT CTGACATCAC CTGGGACACC AATGCTGGTG AAGAGGTGCT GAAAGATTTC
CAGAAGGGCC AAGAAGTTGA AGCCATGGTG CTCTCCCTGG ATCCCGATAA GGAGCGTATC
TCCTTGGGTC TGAAGCAAGC CCAACCCGAT GCTTGGGGTC AGTGGGTAGA TGCCAATCCC
AAGGGTAACG TTGTGATGGG TAAGGTTAAA GAGGTCCTGA GCTCCGGCGT GCTGGTGCAA
CTGGCCGACG AAGTGGATGG TCACATCCGC AAGGCGGAGT TCTCTCAGGA TGACCGTGAG
GGTACCAACC TGACACTGGA GACCGAAGTT GAGTGTCGTG TGATGCAGGT TGACCGTCAG
AAGCGCAAAA TCTCCCTCTC CATCAAAGCG ATGGAAGTGC AGCAAGAGCG CGATGCCATT
AAAGAGTATG CCAGTGATAG CAGCAGTGCC GCCACCAGCA GCTTGGGTGA GGCGCTCAGC
CAAGCGCTGG AAAAGGCCAA TGCCGCTGAA TAA
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| Protein sequence | MTDDLILDDI ADEDFEALLE ESFSKGVGRE GSVVTGTIIQ REGDEFIIDV GLKSEGRLTI
REFYDADGQL TIGVGDSVDV FVERCEDQNG LAVLSREKAK REEAWVLLEE AFNDGKTVDG
RIMGKVKGGY TVDLGGLAAF LPGSQVDVRP VHDISRLQEE TQPFDILKMD RRRGNIVVSR
RTVIEKHREN ARSALLETLH EGMVLDGIVK NITDYGAFVD LGGLDGLLHI TDMSWKRVKH
PSAVVNVGDT VTVQVIKFNS DTQRISLGMK QLLIDPWEGI GAKYPAGAKF SGHVTNITDY
GSFVELEPGV EGLAHVSELT WTKKNIHPSK ILEVNQIVEV MVLDVDADRR RISLGIKQCQ
ENPWEAFATS HPVGAMVKGE IKNITEFGLF VGLEGDIDGL VHLSDITWDT NAGEEVLKDF
QKGQEVEAMV LSLDPDKERI SLGLKQAQPD AWGQWVDANP KGNVVMGKVK EVLSSGVLVQ
LADEVDGHIR KAEFSQDDRE GTNLTLETEV ECRVMQVDRQ KRKISLSIKA MEVQQERDAI
KEYASDSSSA ATSSLGEALS QALEKANAAE
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