Gene Mmc1_0165 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_0165 
Symbol 
ID4481545 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp179498 
End bp179968 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content50% 
IMG OID639720910 
Product6,7-dimethyl-8-ribityllumazine synthase 
Protein accessionYP_864098 
Protein GI117923481 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0054] Riboflavin synthase beta-chain 
TIGRFAM ID[TIGR00114] 6,7-dimethyl-8-ribityllumazine synthase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGATA TTATTGAGCT GGAGGGTCAT CTGACCGTTG ATGGCAAGAA GTTCTGCCTG 
CTTTTGTCCC GTTTTAACAG CTTTATTACC GAGCGTTTGT TGGAAGGGGC GATTGATTGC
ATTGTGCGTC ATGGTGGCAA GCGTGAGGAT ATTACGGTTG CGCGGGTACC GGGTGCCTTT
GAGCTACCGT TGGTGGCGCA GAAGGCGGCT AAGAGTGGCA AATATGATGG TATTGTCTGT
TTGGGTGCGG TAATACGTGG TTCGACGCCT CATTTTGATT ATGTTTCGTC GGAGGTAACG
AAGGGAGTTG CTTCGATTAG TTTGGCCTAT GATATGCCCA TTGGTTTTGG TGTTTTGACC
ACGGATACGG TGGAGCAAGC CATTGATCGG GCGGGGACCA AGGCGGGCAA CAAGGGTTGG
GAAGCGACCA TTTCTGTTAT TGAGATGATC AATCTTCTGG ATGGTATGTA A
 
Protein sequence
MGDIIELEGH LTVDGKKFCL LLSRFNSFIT ERLLEGAIDC IVRHGGKRED ITVARVPGAF 
ELPLVAQKAA KSGKYDGIVC LGAVIRGSTP HFDYVSSEVT KGVASISLAY DMPIGFGVLT
TDTVEQAIDR AGTKAGNKGW EATISVIEMI NLLDGM