| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0158 |
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| Symbol | |
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| ID | 4481030 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 169785 |
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| End bp | 170987 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639720903 |
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| Product | tetratricopeptide repeat protein |
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| Protein accession | YP_864091 |
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| Protein GI | 117923474 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2956] Predicted N-acetylglucosaminyl transferase |
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| TIGRFAM ID | [TIGR00756] pentatricopeptide repeat domain (PPR motif) |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.185124 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGTATTG ATGGTGTGAT GACATTCTCC TTTTTTGTTG AGTGGGCACC GTGGATTGTG
ATGGGGTTGA TTCTTTTTGG GATCGGCTAC CGCATGGGTC AACATGCTCC GATGGAAGAT
ATGGAGGAGA TGGCGCGTCG TCGTGATGCG GCGTTTACGT ATCGTGGTTT AAATTTTTTG
CTTAATGATG AGCCGGACAA GGCGATTGAG GCGTTTAGTC AGGCGGTACG GGTGAATTCG
GAGACGGTAG AGGTTTATTT ATCGTTGGCG AATTTATTTT TGAAGCAGGG GGAGTTAGGT
CGGGCGATAC GGATGCATCA AAATTTATTG GAGCGTCCGA ATTTGAGTCG CGAGACTCGT
ATTGCGGCGT TGTATGGTTT GGGTGAGGAT TATCGTAAGA GTGGTTTTGT GGATCGCGCG
GTGCATGCGT ATCATCAGAC ATTGGAGGTA GATCCTGGTC ATTTAAAGGC GTTGAGGGCG
TTGATGACGC TGCATGAGAA CGAGAAGCGG TGGGATAAAG CGTTAGAGAT GTTGGAGCGT
ATTCGCAAGG TGACGGGGGA TGAGGATCCA CGGCGTGCGG CGCATTTACG GGTACAGATT
GGGCGTGAGC AGTTACGTCA TGATGTTGCA CCGCCGTCGG TGGAGGATGC GACGCGTAAT
TTTGAGCGTG CGATTGAGGT ACATCCTGGT TGTGTTGAGG CACGACGTAT TATGGCGGAG
GTTGCGTTAA AGGGGGGGGA TCCTGGGCAT GCGGTTGATT TATTAAAGGA GTTACGTCAC
ACGCGGCCTG GGCACATGTT TTTATTGGTT GATATATTAC GTCGTTCTTA TGATGCATTG
GAGGATCGGT GTGGTTTTGA GTCATGTATG GACGAGGCGG CGCATGCGCA GAGTGCGTCA
CCGCAATTGA TGGTACAGTG GGGCAAGTGG TTGGAGGCGG AGGGGCGTTT GGAGGAGGTA
TCGGCGTTGT TGGAGATGGG TTTAAGGCGG CGTCCGGATT CGGCGGTATT GGCGCAGTGG
TATGTTGCTT TTTTGGGGCG TCATGGTCGT TCTGATGAGG GTTTATTGGT TGCTACGCGG
TGTTTGGATG GCATTGTGGG GCGTCAGCCT AATTTTCGTT GCACGCATTG TGGGTTTGAG
AGTCATGAGA TTTATTGGCG TTGTCCGCAG TGTCATGAGT GGGATGAGAT GGAGCCGTTG
TAG
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| Protein sequence | MRIDGVMTFS FFVEWAPWIV MGLILFGIGY RMGQHAPMED MEEMARRRDA AFTYRGLNFL
LNDEPDKAIE AFSQAVRVNS ETVEVYLSLA NLFLKQGELG RAIRMHQNLL ERPNLSRETR
IAALYGLGED YRKSGFVDRA VHAYHQTLEV DPGHLKALRA LMTLHENEKR WDKALEMLER
IRKVTGDEDP RRAAHLRVQI GREQLRHDVA PPSVEDATRN FERAIEVHPG CVEARRIMAE
VALKGGDPGH AVDLLKELRH TRPGHMFLLV DILRRSYDAL EDRCGFESCM DEAAHAQSAS
PQLMVQWGKW LEAEGRLEEV SALLEMGLRR RPDSAVLAQW YVAFLGRHGR SDEGLLVATR
CLDGIVGRQP NFRCTHCGFE SHEIYWRCPQ CHEWDEMEPL
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