Gene Mmc1_0152 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_0152 
Symbol 
ID4481006 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp163172 
End bp163576 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content48% 
IMG OID639720897 
Productanti-sigma-factor antagonist 
Protein accessionYP_864085 
Protein GI117923468 
COG category 
COG ID 
TIGRFAM ID[TIGR00377] anti-anti-sigma factor 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGGG CAATCGATTA TGATGGGTGG GGTACCATGA TTAAAACGTG GAATATAAAG 
GGTAAAATAC ATATTCAGTT GGATGAACCC TTGAATGCCA AAAATCAAGT AGCCTTTCTC
AAGGCGGTGG AGACCCACCC TCAGGGTGAG CAGGTCTCAC TGCATATGGA TTTGGTTCCC
TACATTGACA GTTCAGGGCT GGCCTCTCTG TTGCAGTTAC GTGATCATGC CCATGGCTTT
CATAATGTTA TCTTGTGCAA TCCGTCTGAG CGGGTGTTGC ACACGCTTAG GGTTTCCAAT
TTTCACCGGC TCTACACCAT TCAACAAAGC CCCAAAACAG CTCAATCCAC CGCCACAGCA
GCTTCAGTTC AGCCCATGTT AAATGGGGGG CACAACGCCC TCTAA
 
Protein sequence
MSRAIDYDGW GTMIKTWNIK GKIHIQLDEP LNAKNQVAFL KAVETHPQGE QVSLHMDLVP 
YIDSSGLASL LQLRDHAHGF HNVILCNPSE RVLHTLRVSN FHRLYTIQQS PKTAQSTATA
ASVQPMLNGG HNAL