| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0142 |
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| Symbol | |
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| ID | 4480996 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 151501 |
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| End bp | 152022 |
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| Gene Length | 522 bp |
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| Protein Length | 173 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639720887 |
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| Product | peptide deformylase |
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| Protein accession | YP_864075 |
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| Protein GI | 117923458 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
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| TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00942793 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.794986 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCATAT TGCCCATTGT TACTGCCCCC GATCCGGTTT TAAAAAAACG GGCGGAGCCT
GTGGTGGCGG TAGATGCGTC GATCCAGCAG TTGATGCGGG ATATGTTAGA GACCATGTAT
GCCGCACCCG GCATTGGTTT AGCGGCACCC CAGGTGGGGG TTTCCAAGCG GGTGATTGTG
GTGGATGTCA CCTATTCAGA AGCCGCCGCG CAGGATGGCG AACCCTACTG TTTGGCCAAT
CCAGAGATCA TTGCTGCGGA GGGTGAGATC ACCTGGGAGG AGGGGTGTCT TTCGGTACCG
GAGAGCTACG GTAAGGTAGA CCGCAAGGAG CATGTGGTGG TACGGGGTCT TAATGCCCAA
GGAGAGCTGG TGACGCTGGA GGCGCATGGT CTGTTTGCGG TTTGTCTACA GCATGAGATC
GACCATTTGG ATGGCACACT GTTTATTGAC CATCTCTCCT CGCTCAAGCG CACGATGATA
ATAAAAAAGC TAAAAAAGCT TAAAACGGAG CAAGCCTCAT GA
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| Protein sequence | MAILPIVTAP DPVLKKRAEP VVAVDASIQQ LMRDMLETMY AAPGIGLAAP QVGVSKRVIV
VDVTYSEAAA QDGEPYCLAN PEIIAAEGEI TWEEGCLSVP ESYGKVDRKE HVVVRGLNAQ
GELVTLEAHG LFAVCLQHEI DHLDGTLFID HLSSLKRTMI IKKLKKLKTE QAS
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