| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0138 |
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| Symbol | |
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| ID | 4481027 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 147442 |
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| End bp | 148494 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639720883 |
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| Product | pseudouridylate synthase |
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| Protein accession | YP_864071 |
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| Protein GI | 117923454 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0585] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00094] tRNA pseudouridine synthase, TruD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0151671 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCATG AAATTTCAGA CATACAGCCA CATTTGCCCA AACTGACCAG CCAACCGGGT
TTGGGGGGGC AACTGAAACA ACAACCGGAA GATTTTTTGG TCGAGGAGCT ACGTCCCAAC
CCCTTGAGTG GCGAGGGTGA ACACTGGATT GTGCGCATTA TCAAACGAGA TTTGACCACC
GATCAGGTGG CGGCTTGGTT GGCGAAACGG TTTGCAGTGC CCCAAAAGGA TGTGGGGTTT
GCTGGGCAAA AGGATCGTCA GGCGGTGACC ATACAGGACT TTTCGGTCTA TCTGCCGGGG
CAGGCCCCGC CGCAGGGGTG GGCGGATGAT CCCTTGCCGG GCATAACCAT CCACTCTGTG
GGGCGAGATC GGCGCAAGAT TAAGCCGGGC ATGCTCAGCG GCAACCGTTT TGTGATCCGA
CTACGGGGCT GCGATGGTGC CCTGAGTGCA AGCCAGCGGC AGCAGCTGGC CGATGCGACC
CAGGCGCGTC TATTGCGCTA TGGTGCGCCC AACTATTTTG GTCCCCAGCG CTTTGGTCGA
GATGGGGATA ACTGGCAGGC GGGTTTAAAG CTGTTGCGTG CGGGCCGCAA GCGGCGTAAG
GGCAACCGTA ATACCGAGGC CTTGCAGATC TCAGCGGTGC GTTCCGAGCT GTTTAATCGG
GTGGTCACGG CCCGTTTGCA ACAGGGGCTG TTTAACACCC TGTTGCTGGG GGATGTGGTG
CAGTTGGCGG GGCGTACAGC GGCCTTTCGG GTAGAGGATT TAGCGGCTGA GCAGCCCCGC
TTTGATGCGG TGCAGATTCA CCCTACCGGT CCTCTGTTTG GTCGAGACAT GTTGGCCCCC
ACCGGTCAGG CCGCAGAGAT TGAGGCGGCC ATTGCCCAAG CCGAGCCAGA GGCGATTGAG
CTGCTGGAGC AGTTTGATAT GCAAGGGGTA CGTAAGTCTC TGCGACTTAT ACCCGGAGAG
CTGAGCCACC ACTGGGAGCA GGCCGACCTG ATTGTCACCT TTACCCTGCC ACGGGGCTGT
TTTGCCACCA GTATTATGCG GGAGTATATG TAA
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| Protein sequence | MNHEISDIQP HLPKLTSQPG LGGQLKQQPE DFLVEELRPN PLSGEGEHWI VRIIKRDLTT
DQVAAWLAKR FAVPQKDVGF AGQKDRQAVT IQDFSVYLPG QAPPQGWADD PLPGITIHSV
GRDRRKIKPG MLSGNRFVIR LRGCDGALSA SQRQQLADAT QARLLRYGAP NYFGPQRFGR
DGDNWQAGLK LLRAGRKRRK GNRNTEALQI SAVRSELFNR VVTARLQQGL FNTLLLGDVV
QLAGRTAAFR VEDLAAEQPR FDAVQIHPTG PLFGRDMLAP TGQAAEIEAA IAQAEPEAIE
LLEQFDMQGV RKSLRLIPGE LSHHWEQADL IVTFTLPRGC FATSIMREYM
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