Gene Mmc1_0098 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_0098 
Symbol 
ID4481099 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp102678 
End bp103601 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content60% 
IMG OID639720845 
Productdihydroorotate oxidase B, electron transfer subunit 
Protein accessionYP_864033 
Protein GI117923416 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism 
COG ID[COG0543] 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCAAG CCATGCGTCC CAAACTTTGT CGTGAAACTG CACAGGTGGT GTTTAACCGG 
GCGCTGCCGG GGGATCAATA TGTGATTCGC CTGCGGGCCC CTGGATTGGC GCAAGGTTGC
CGTCCTGGTC ATTTTGCCCA GGTGGATTGT GGTCCCACCA CCACCTTGCC CCGCCCTCTC
TCTATTTTGG ATGCAGATGC GGCAGCGGGT ACGGTGGATA TTTTCTACAA GGTGGTGGGG
CGCGGTACAG AGCTCATGGC CCAGTGGCAG GCGGGTGCAG AGGTGACGTT AATGGGGCCA
GTTGGCCGTA CCTTTACCCT GATTGATGCG CCTAAACGGG CGGTGTTGAT TGGGGGGGGC
GTGGGGGCCG CGCCGGTGGA TTTTTTGGCC CGTACGCTGG CGGGACGTGG GGTTGAGTGT
ACTCTATTTT TGGGTATGGA GAGTGAGAGC CCCTTTGTTT TGGAGCAAGC TAAGCAGCCG
CTACCGGGTG TTGAGAGGTC GATTATTCTG GCACTAGCAC CCCTGCAAGG GGCAGGGGTG
CGCAGCCGCA TGGCGGCATT GACGCCGCGT CAGGGTTGGT TTACGGGCTA TGTCACGGAT
CTGGCGGCGG CCTATTTAGC GGCATTAACG GACCAACAAC GGGAGGAAAC CGTTCTGTAT
ACCTGTGGTC CGACCCCCAT GATGGCGGCG GCCAATAGGG TCGCCAAACG GTTTGCTCTC
TCGGGTCAGG CTTCCATGGA AGAGCATATG GCGTGTGGTT TTGGGGGATG TGCCGGCTGT
GTGGCCCCCA TTCGGGTCGG TGGGGCGTTG GGTTGGAACT ATCGCCGGGT TTGTGTGGAT
GGGCCGGTCT TTGATTTGGA TGAGATTGCG TGGGAGCAGA TGGGTTATGC GCCTGCTCCG
GTGCAGGCTT GTGGCTGTCC CTGA
 
Protein sequence
MSQAMRPKLC RETAQVVFNR ALPGDQYVIR LRAPGLAQGC RPGHFAQVDC GPTTTLPRPL 
SILDADAAAG TVDIFYKVVG RGTELMAQWQ AGAEVTLMGP VGRTFTLIDA PKRAVLIGGG
VGAAPVDFLA RTLAGRGVEC TLFLGMESES PFVLEQAKQP LPGVERSIIL ALAPLQGAGV
RSRMAALTPR QGWFTGYVTD LAAAYLAALT DQQREETVLY TCGPTPMMAA ANRVAKRFAL
SGQASMEEHM ACGFGGCAGC VAPIRVGGAL GWNYRRVCVD GPVFDLDEIA WEQMGYAPAP
VQACGCP