| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0097 |
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| Symbol | |
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| ID | 4481098 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 101607 |
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| End bp | 102569 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639720844 |
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| Product | sigma-54 dependent trancsriptional regulator |
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| Protein accession | YP_864032 |
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| Protein GI | 117923415 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCCTC ACGACCCCAA ACAGGAGATT CTAACCCGTA CCCCGGAGAT GGAATCTGTC
ATGCGTGCCG CTACCCTCGT GGCCCAAACC AATGTAACCG TGCTCATAAC CGGCGAAAGC
GGTACCGGCA AAGAGCGCAT CGGACACCTG GTGCACGCAG AAAGTCGCCG AAATAAAGGT
CCCTGGGTTC CCGTTAACTG CGCCGCCCTG CAAGATAACC TCGCCGAATC AGAACTGTTT
GGCCACGTGC GCGGCGCCTT CACCGGCGCA ACCGATGCCC ACCAAGGGCG CGTTCGCGCC
TCCTCCGGTG GGACACTGTT TCTCGACGAA GTGGGTGAAT TAAGCCTGCC ACTACAGGCA
AAACTCCTAC GTCTGCTTGA AAATAGTGAA TGCCAAGTGG TCGGACAAGC GCAACCTGTG
CGGGTGGATA TCCGTATCGT CGCCGCCACC AATGTGGACC TCGCACAGCG GGTGCGCGAG
GGTCTGTTTC GTGAAGATCT CTTCTACCGC CTCAATATCG CACCCTTAAC CCTGCCCCCC
CTAAGGGACC GTCCCCGCGA TATTCCCCTG CTCATGGATC ACTTTTTACT GGAAGCCGCA
GCCCGCTTTG AACGTAAACC GCCACGCTTT ACCAGTAAAG CGCTCCAGCA AATCCAAAAC
CACCGCTGGC CCGGGAATAT CCGCGAACTG CTCAATTTTT GTACGCGTAT GGTCATCTAT
CACGGCGGCG AAGAGGTTGA CCTGCCCGCA CTGCCCGTCG AGCTGCGGGG TACGGTGCCC
GAGGTCGCCT CCGGATCCCC CTTCGACCTG CCCTCACAAG GGGTGGACCT AACCGCCGTG
GAGCGTGGCC TCATCAAGCA GGCGCTGGAA CGCGCGACAG GTAATAAATC CAAGGCCGCA
CGCCTGTTGG GCTTAACCCG CGATACCCTG CTCTATCGCC TAAAAAAACA TACCCTCGAC
TAA
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| Protein sequence | MTPHDPKQEI LTRTPEMESV MRAATLVAQT NVTVLITGES GTGKERIGHL VHAESRRNKG
PWVPVNCAAL QDNLAESELF GHVRGAFTGA TDAHQGRVRA SSGGTLFLDE VGELSLPLQA
KLLRLLENSE CQVVGQAQPV RVDIRIVAAT NVDLAQRVRE GLFREDLFYR LNIAPLTLPP
LRDRPRDIPL LMDHFLLEAA ARFERKPPRF TSKALQQIQN HRWPGNIREL LNFCTRMVIY
HGGEEVDLPA LPVELRGTVP EVASGSPFDL PSQGVDLTAV ERGLIKQALE RATGNKSKAA
RLLGLTRDTL LYRLKKHTLD
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