Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_0088 |
Symbol | |
ID | 4481089 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 92776 |
End bp | 93432 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 639720835 |
Product | hypothetical protein |
Protein accession | YP_864023 |
Protein GI | 117923406 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGTCGAAC GCTTGCCCGC TGATCCGTTT GAGCGTATTC AAGCCGGTCT TAAAATCAGT CTAGAGCGTC CCATGCTCTC TAACGAGCTG ACCATGCCCG GCGTCAAGCG GGAAGATCCC GACTCCGTGC GCCCCTTAGA GGAGGAGTGG CAGGCCGCCC GTCAACGGAT CGCCCAGTTT AATGCCCAGC GTAATTGGAT GGGGGTGCTC AATACCCTGC TGGAGATGAG CAACAATGAC CGTCATCCCG AAGCCTACTT GGCCCGCCTA CAGGCCGCTT GGTTGGTGGT CAAACTGCCC CAAGCCCCGG TCTCCCACGT GGTCATCGTG CTCTATAATC TGCTGGCCTC CCTCGAGTCC GGACATCCCG CCGCTGGCCC CTTGGCGGCG CTGGCCAATC TTATGGCACT CCATCGCACA CCAGACCATC CCGAACGGGA GTTGGCCCAG ATGCAAGCCC AACAAATGTG GGACATGGCC GCCCATAACC TGGGTATTGA GCCGGGCTCG CATTTTGAAT CCTGGATGGA ACGCAACGGC CTAAACGACC CCAACAGCTT TGTTCCCCGC ATTATGGGTA TGCTGGAAAA GATGGAAAAC CGCCCCTGGT GGATCGATAA AGAGGCCATC CAAGAAGATA TGATGCAGCA AGCGTGA
|
Protein sequence | MVERLPADPF ERIQAGLKIS LERPMLSNEL TMPGVKREDP DSVRPLEEEW QAARQRIAQF NAQRNWMGVL NTLLEMSNND RHPEAYLARL QAAWLVVKLP QAPVSHVVIV LYNLLASLES GHPAAGPLAA LANLMALHRT PDHPERELAQ MQAQQMWDMA AHNLGIEPGS HFESWMERNG LNDPNSFVPR IMGMLEKMEN RPWWIDKEAI QEDMMQQA
|
| |