Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_0084 |
Symbol | |
ID | 4483654 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 89589 |
End bp | 91028 |
Gene Length | 1440 bp |
Protein Length | 479 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639720830 |
Product | flagellar hook-associated 2 domain-containing protein |
Protein accession | YP_864019 |
Protein GI | 117923402 |
COG category | [N] Cell motility |
COG ID | [COG1345] Flagellar capping protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.317044 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGACCG GTAGTATTAC CTTTGGGGGG TTGGCCAGTG GCTTGCCTGC GGATATCGTC GATCAATTGA TGCAGTCTGA GCAAGCGCGT CTGACCAAGA TGAACCAGAC GAGCAACCAA GTAAGCGCGA CCAAGAGCAC CTATAGTTCG CTGGAGTCGC AGTTGCTGGC GTTGAAGAGC AAGGCTGAAG ATATGCAGAG TGCGGATTTT TTCCGCCCGC ATACCGCCAC CAGCAGCGAT GAGGATGTGG CAACCATCAG TGCAGACAGC GATGCTCAAG AGGGCAACCA CAGTATAACC GTCAATCAGT TGGCAACCTA TGATACCTTT GTTTCCAAGG GTTCGGTGAC CACAACGACG GCTGGATTGT CGGCTGACAC CACTTTTTCG TTTGACTACA ACGGTACGAG CTACAGTGTT GCGCTGACGG CGGGGGATAC CCTGGCGGAT ATCGCCGATG CCATTACCAA TACCACCTAT GATAATGAGG ATGATGGTGA GGGGGTAACG GCCAGTGTGC TCTATGATGG GAGCAACTAT CGCCTGCTGC TTAATGCGCG GGATAGCGGT ACCAACAGTG GGGCCAGTCG TTTGGATCTC AGTGGTGCAG CGGATTTGGC CTTCGATTCA GGAGAGACCA TTACCGGTGG TGTAACGGGA TCCAATGATA ACAGCGCATG GTGGAACTCG GTGGCCGGCG TAGACGCCAG TTTGACGGTG GATAACATTG CAGTGACCTC CACCACCAAC GAGGTGAGTG ATGTCTTAGC GGGCATAAAA ATGTCGCTCA AGAGCACGGG CAATTTTACG ATTTCGATTA CCAATGATGA AGAGACGCTG AAAACCAATG TTCAGTCCTT TGTGGACAGT TTTAACTCGG TTATCTCTTT CATCAACAAC AACAAGAGTA GCTTTGGTGG GGATTCGTTA GCGCGCAATA CCATTAACAT GTTGCGGGCC GAGATCAACA CCCCGACCAG TGATAGCAGC TCGCCTTATA GTGAGCTGTC TACCTATTCG ACGCTCTCAT CCATCGGTAT CAAGACGGAT CGAAGCTCTG GTTTGCTCTC CATTGATTCC ACCGATTTTT CTGAGGCGAT GAGCAATGGT TTTAGCAAGA TAGCCAGCAT TTTCACCTCT AAGCCGTCAT CGGCAGACGA GACGGCCTTC GAGACCGCCG GGGGTAATGA GGGACTCTCC TATCGTATGG AGAGCCTGGT TTACTCTTTG ACCACCGATA CAGACAATCC GTTTGATGCC AAAAGCAGCG GTTTGCAGGC GCGTTTGGAC AGTATGGCGA CATCCATTGA GCGTGAGGAG TCGCGTTTGG AGAAGGTGCG GGATCGTTTG ACCAAGCAGT ATGCCAACTT GGAACAGCTT ATGTCGCAGA TGCAATCAAC CCAATCTGCG CTGACATCAG CACTCGCTGG GTTATCATAA
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Protein sequence | MATGSITFGG LASGLPADIV DQLMQSEQAR LTKMNQTSNQ VSATKSTYSS LESQLLALKS KAEDMQSADF FRPHTATSSD EDVATISADS DAQEGNHSIT VNQLATYDTF VSKGSVTTTT AGLSADTTFS FDYNGTSYSV ALTAGDTLAD IADAITNTTY DNEDDGEGVT ASVLYDGSNY RLLLNARDSG TNSGASRLDL SGAADLAFDS GETITGGVTG SNDNSAWWNS VAGVDASLTV DNIAVTSTTN EVSDVLAGIK MSLKSTGNFT ISITNDEETL KTNVQSFVDS FNSVISFINN NKSSFGGDSL ARNTINMLRA EINTPTSDSS SPYSELSTYS TLSSIGIKTD RSSGLLSIDS TDFSEAMSNG FSKIASIFTS KPSSADETAF ETAGGNEGLS YRMESLVYSL TTDTDNPFDA KSSGLQARLD SMATSIEREE SRLEKVRDRL TKQYANLEQL MSQMQSTQSA LTSALAGLS
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