Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_0079 |
Symbol | |
ID | 4483649 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 84532 |
End bp | 86298 |
Gene Length | 1767 bp |
Protein Length | 588 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639720825 |
Product | flagellar hook-associated protein FlgK |
Protein accession | YP_864014 |
Protein GI | 117923397 |
COG category | [N] Cell motility |
COG ID | [COG1256] Flagellar hook-associated protein |
TIGRFAM ID | [TIGR02492] flagellar hook-associated protein FlgK |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0654859 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGGGA AAATGGCTGT GACGATCTCC TCACTGCTCA ATATCTCCAA AACCGGCCTT CTGAGCAACC AGTATGCACT GAGCTCGGTT TCTCAGAACA TCGCCAACGT CAATACCGCT GGTTATTCCC GTCAGACGGC GGCTCTGACC AGTAATCAGG GTGCGTTGCG TGGTAACACC GATGGTATTG GTGGTGGTGT TGCTGTCTCT GACTTAAAGC GCAGTGTGGA TGCGCTGGTG GATAACCGTA TTCAGCTGGG GTTGGGCGAG AAGGGTCGTT TGGAGACCCG CAACCAGTAT TTGAATATGA TCGAAAATGT GTTCAACGAC CAGGATGGTG ATGGTCTGTC GACCCGGTTG GATGAATTTT TTTCCATGGT TGATAAGTTG GCGGACAACC CCACCAGTCC CGCTTCTCGG GCGGAGTTGG TGGCCAGTGC TCAGAATGTC ACCAACTTTG CCAATAAGAT GTACGACGAT TTGGCGGGTC TGGCGCTGCC GGTTGATCAA GAGATTGATG TCTTGGTCAA CACCATCAAC ACCAAGCTTA AAAGCTTGGC TGAGGTTGAT AGTGCCATTC AATTACGTGA AAAAACGAAT AATCCTGCGT TGGACCTGAA GGACCAGCGG GATGAGATGA TTCGTGAGCT CTCTGGCATG ATCGACGTTC AGGTGCTCTC CAATCAGGAT GGTTCCACCA CCCTGATGAC AGCCGGTGGT GAGCTGTTAA TGGATCATGG TTTTACAGCC ACTTTTGGGC GCGGTGCATT AGATACCACC ACAGGTTTTG CCGGCATTAC CGTTAATGGC AAAAGTGGTG ACTATACCGA TAAGCTCTCC AGCGGTTCTT TGAAAGCACT GTTGGAAGTT CGTGATCAGG TGGTGGGTGG CAGTAGCGGC TATCTGACCA AGTTAGAGAG CATTGTTGAC GAGCTGCGTT TTCAGGTCAA CAGCATCACC AGCACCTCAT CCAGTATGTA TTTGAACCAG AGCCAAACTG GCGTGTTTGA TTTGGGTACG CAGACCGCGA CGGCAGTGAA CGCCCAGGAC TACACCACGG TCAATGCCCC GCCGCCAGAT TTGGGGCGGG TTGTGGATGG CACCGTCACG TTTGCTTATG GTAGCGATGC CAATAATCTG AGCTTTGATA GTGTCAATAT CACGTCTTCG ATGACCATTG ATGAGGTGGT GGCGGCCTTA AATGCTTCTA ATGCGGTAAG TGCAAGCGTC AATGCCAATA ATCAGCTCTC CATTGCGGCA AAAAGCACCT ACTACGCCGT CTCTGCTGAC AGCAGTAACA TTATGGCAGC CATGGGTATT GGTGCCCTCT TTGGAGGAAC TGGGGCATCC AATATGGCGG TGAACAGTGA AATGGTTGCT GACCAGACCA CCGTGCCGGT GGGGCGTATC CGTACCGACG CCAACGGCCT GCCACAGTTT GATAATGCGG ATAATGACGG GGTTTTGGCG CTGGGCGATC TGCGCAACAC CAAATTTACC CTGTTTGGTG AATCCCTCAC CTTGTCGGCC CACTACGCTT CCACCATTAG TCAACTGGGT GCTGAGCAGG CCAGCAATGA GGAGCAGTTG GGGGCGGCGA CCTCCACCTA CAATTTTATG CAACAGGTCC GGGCCTCTAT TTCCGGTGTC TCTCTGGAAG AGGAGTTGAC CGACCTGATG CGTTTTCAGC GGGCCTTTCA GGCCTCCAGT AAAATGGTGG TGACCGCCGA CGAGCTGTTG CAGTCGGTCA TCGGCATGGT GAGATAA
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Protein sequence | MQGKMAVTIS SLLNISKTGL LSNQYALSSV SQNIANVNTA GYSRQTAALT SNQGALRGNT DGIGGGVAVS DLKRSVDALV DNRIQLGLGE KGRLETRNQY LNMIENVFND QDGDGLSTRL DEFFSMVDKL ADNPTSPASR AELVASAQNV TNFANKMYDD LAGLALPVDQ EIDVLVNTIN TKLKSLAEVD SAIQLREKTN NPALDLKDQR DEMIRELSGM IDVQVLSNQD GSTTLMTAGG ELLMDHGFTA TFGRGALDTT TGFAGITVNG KSGDYTDKLS SGSLKALLEV RDQVVGGSSG YLTKLESIVD ELRFQVNSIT STSSSMYLNQ SQTGVFDLGT QTATAVNAQD YTTVNAPPPD LGRVVDGTVT FAYGSDANNL SFDSVNITSS MTIDEVVAAL NASNAVSASV NANNQLSIAA KSTYYAVSAD SSNIMAAMGI GALFGGTGAS NMAVNSEMVA DQTTVPVGRI RTDANGLPQF DNADNDGVLA LGDLRNTKFT LFGESLTLSA HYASTISQLG AEQASNEEQL GAATSTYNFM QQVRASISGV SLEEELTDLM RFQRAFQASS KMVVTADELL QSVIGMVR
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