Gene Mmc1_0079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_0079 
Symbol 
ID4483649 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp84532 
End bp86298 
Gene Length1767 bp 
Protein Length588 aa 
Translation table11 
GC content52% 
IMG OID639720825 
Productflagellar hook-associated protein FlgK 
Protein accessionYP_864014 
Protein GI117923397 
COG category[N] Cell motility 
COG ID[COG1256] Flagellar hook-associated protein 
TIGRFAM ID[TIGR02492] flagellar hook-associated protein FlgK 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0654859 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGGGA AAATGGCTGT GACGATCTCC TCACTGCTCA ATATCTCCAA AACCGGCCTT 
CTGAGCAACC AGTATGCACT GAGCTCGGTT TCTCAGAACA TCGCCAACGT CAATACCGCT
GGTTATTCCC GTCAGACGGC GGCTCTGACC AGTAATCAGG GTGCGTTGCG TGGTAACACC
GATGGTATTG GTGGTGGTGT TGCTGTCTCT GACTTAAAGC GCAGTGTGGA TGCGCTGGTG
GATAACCGTA TTCAGCTGGG GTTGGGCGAG AAGGGTCGTT TGGAGACCCG CAACCAGTAT
TTGAATATGA TCGAAAATGT GTTCAACGAC CAGGATGGTG ATGGTCTGTC GACCCGGTTG
GATGAATTTT TTTCCATGGT TGATAAGTTG GCGGACAACC CCACCAGTCC CGCTTCTCGG
GCGGAGTTGG TGGCCAGTGC TCAGAATGTC ACCAACTTTG CCAATAAGAT GTACGACGAT
TTGGCGGGTC TGGCGCTGCC GGTTGATCAA GAGATTGATG TCTTGGTCAA CACCATCAAC
ACCAAGCTTA AAAGCTTGGC TGAGGTTGAT AGTGCCATTC AATTACGTGA AAAAACGAAT
AATCCTGCGT TGGACCTGAA GGACCAGCGG GATGAGATGA TTCGTGAGCT CTCTGGCATG
ATCGACGTTC AGGTGCTCTC CAATCAGGAT GGTTCCACCA CCCTGATGAC AGCCGGTGGT
GAGCTGTTAA TGGATCATGG TTTTACAGCC ACTTTTGGGC GCGGTGCATT AGATACCACC
ACAGGTTTTG CCGGCATTAC CGTTAATGGC AAAAGTGGTG ACTATACCGA TAAGCTCTCC
AGCGGTTCTT TGAAAGCACT GTTGGAAGTT CGTGATCAGG TGGTGGGTGG CAGTAGCGGC
TATCTGACCA AGTTAGAGAG CATTGTTGAC GAGCTGCGTT TTCAGGTCAA CAGCATCACC
AGCACCTCAT CCAGTATGTA TTTGAACCAG AGCCAAACTG GCGTGTTTGA TTTGGGTACG
CAGACCGCGA CGGCAGTGAA CGCCCAGGAC TACACCACGG TCAATGCCCC GCCGCCAGAT
TTGGGGCGGG TTGTGGATGG CACCGTCACG TTTGCTTATG GTAGCGATGC CAATAATCTG
AGCTTTGATA GTGTCAATAT CACGTCTTCG ATGACCATTG ATGAGGTGGT GGCGGCCTTA
AATGCTTCTA ATGCGGTAAG TGCAAGCGTC AATGCCAATA ATCAGCTCTC CATTGCGGCA
AAAAGCACCT ACTACGCCGT CTCTGCTGAC AGCAGTAACA TTATGGCAGC CATGGGTATT
GGTGCCCTCT TTGGAGGAAC TGGGGCATCC AATATGGCGG TGAACAGTGA AATGGTTGCT
GACCAGACCA CCGTGCCGGT GGGGCGTATC CGTACCGACG CCAACGGCCT GCCACAGTTT
GATAATGCGG ATAATGACGG GGTTTTGGCG CTGGGCGATC TGCGCAACAC CAAATTTACC
CTGTTTGGTG AATCCCTCAC CTTGTCGGCC CACTACGCTT CCACCATTAG TCAACTGGGT
GCTGAGCAGG CCAGCAATGA GGAGCAGTTG GGGGCGGCGA CCTCCACCTA CAATTTTATG
CAACAGGTCC GGGCCTCTAT TTCCGGTGTC TCTCTGGAAG AGGAGTTGAC CGACCTGATG
CGTTTTCAGC GGGCCTTTCA GGCCTCCAGT AAAATGGTGG TGACCGCCGA CGAGCTGTTG
CAGTCGGTCA TCGGCATGGT GAGATAA
 
Protein sequence
MQGKMAVTIS SLLNISKTGL LSNQYALSSV SQNIANVNTA GYSRQTAALT SNQGALRGNT 
DGIGGGVAVS DLKRSVDALV DNRIQLGLGE KGRLETRNQY LNMIENVFND QDGDGLSTRL
DEFFSMVDKL ADNPTSPASR AELVASAQNV TNFANKMYDD LAGLALPVDQ EIDVLVNTIN
TKLKSLAEVD SAIQLREKTN NPALDLKDQR DEMIRELSGM IDVQVLSNQD GSTTLMTAGG
ELLMDHGFTA TFGRGALDTT TGFAGITVNG KSGDYTDKLS SGSLKALLEV RDQVVGGSSG
YLTKLESIVD ELRFQVNSIT STSSSMYLNQ SQTGVFDLGT QTATAVNAQD YTTVNAPPPD
LGRVVDGTVT FAYGSDANNL SFDSVNITSS MTIDEVVAAL NASNAVSASV NANNQLSIAA
KSTYYAVSAD SSNIMAAMGI GALFGGTGAS NMAVNSEMVA DQTTVPVGRI RTDANGLPQF
DNADNDGVLA LGDLRNTKFT LFGESLTLSA HYASTISQLG AEQASNEEQL GAATSTYNFM
QQVRASISGV SLEEELTDLM RFQRAFQASS KMVVTADELL QSVIGMVR