Gene Mmc1_0077 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_0077 
Symbol 
ID4483647 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp82288 
End bp83112 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content52% 
IMG OID639720823 
Productflagellin domain-containing protein 
Protein accessionYP_864012 
Protein GI117923395 
COG category[N] Cell motility 
COG ID[COG1344] Flagellin and related hook-associated proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.104255 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCACTGA CAATCAATAC CAATATGGCC GCTCTTATTG CGTCTAAGAA CCTGAATAAT 
GTTCAGGGTT CTTTGAACAA GAGCTTTCAG CGTCTCTCTT CGGGGTTACG TATCAACAGC
GCAGCAGATG ATGCTGCGGG TCTCTCGCAG GCGAGTCGTA TGAGCAGTAC GATTCGTGGG
TCTAACCAAG CCATTCGAAA TACCAATGAT GGTATTTCGA TTGCTCAGGT GGCCGAAACC
GCGCTCAATG AGACTGAATC AGCCCTTCAG CGTATCCGGG AACTCACTGT TCAGGCTGCC
AATGGCACCA TGACGACCAC GGATCGTTCA GATATTAGTA AGGAGGTACA GGCATTAGCG
GCAGAGATCC AACGGATCTC CACGGATACC AAGTTCAATG GTAACACACT GCTTAGTACG
GGTGGCTTTT CTGCCTATAT TAAGACCAAT GCAGAAGCAA CGGCTGCGAC GGTAGCGGTG
CAGGTTGGCT CGGCGACTTC CACAGCGCTG GGTATCTACC AGACCCTTAG TTTTGCTACA
GCCAGTAAGG CAACCTCTGC CTTGACTGCC ATTGATAACG CATTGAGCAG TGTCTCCTCC
ATGCGGGCCT CCTTAGGTGC GGTACAGAGC CGTCTGGAGT CGGTCGTATC CGGTTTGCAA
GGCATCGTAG AAAATACCAC GTCGGCACGA TCTCGGATTA TGGATGCCGA TGTGGCTGCT
GAGACCACCA ACCTGACTCG GTCGGCGATC ATTCAGCAGG CCGGAGTTGC GATTTTGGCA
CAGGCGAATC AACAGCCATC CATCGTGTTG GCGCTGCTTA GCTAA
 
Protein sequence
MALTINTNMA ALIASKNLNN VQGSLNKSFQ RLSSGLRINS AADDAAGLSQ ASRMSSTIRG 
SNQAIRNTND GISIAQVAET ALNETESALQ RIRELTVQAA NGTMTTTDRS DISKEVQALA
AEIQRISTDT KFNGNTLLST GGFSAYIKTN AEATAATVAV QVGSATSTAL GIYQTLSFAT
ASKATSALTA IDNALSSVSS MRASLGAVQS RLESVVSGLQ GIVENTTSAR SRIMDADVAA
ETTNLTRSAI IQQAGVAILA QANQQPSIVL ALLS