| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0076 |
|---|
| Symbol | |
|---|
| ID | 4483646 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | + |
|---|
| Start bp | 81137 |
|---|
| End bp | 81964 |
|---|
| Gene Length | 828 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 639720822 |
|---|
| Product | flagellin domain-containing protein |
|---|
| Protein accession | YP_864011 |
|---|
| Protein GI | 117923394 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG1344] Flagellin and related hook-associated proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.18424 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGGTTGA CGATTTACGG TAATGTCTTC TCCTTAGACG CGCATCGGGC GCGATCCCGT
CGGTCTGATC TGTCCGATCG GGGTACGTTC AAGCGCTTGA TTTCACGTAT TGAGCCGGAT
GCAGGTGAGC CAGCGGTATT GGATATGCTG CGGGATTATC GACGTGCCAA CCGACTAAGG
ACGGTGAACC AAGCTCGGCA AAATGCCAAT GCAGGGATCT CTACCATTCA GGTGGCAGAG
CAGGCCCTGC GTGAGACAGA AAGCGCCTTG CAGCGCATAC AGGAGATCAC TTCACGTCCC
TTGGATGGGG AGCCGGTGGA GGGTTCAAAA CGGGCCAAGT ATGACCAAGA GGTGGCTCAA
TTGGTGCGGG ATATCGACGG TTTAGCCGGA GAATCTCAAC GCCATAGTAT GCGTTTAATG
CGGGGGGGGC TTTCCTCCCA CAGCTTTGCG GTGGGGGTGG ATCAGCCCGA GGAGATCTGT
TTCACCGTGG ATGATACCAG CAGTGCGCAG ATGGGGGTGG AGGCCTCTGT CGCGTGGGAT
GATCCACAGT TGGCACTGGA TGCCTTGGCG AATATTCACC GTGCGATGAA TCGGGTGGCA
CAGGTACGGC AAGAGCTGGA TCAGGTGCAC AATCGTTTTA ATACGGTGCT TGAACGGCTA
TCGAGCCTTT CGGAACAGGC TTTGACGGAG CGTCGTGGCA TTGAGAGCGC GCAGGAGGCC
GAAACCGTTG TGGCAGGGCT ACACAGTGCG CTTTCGCAGC AGGCCGAAGC AGCGATCACC
ATGCAGGCCA ATCAACATAC CATGTTGGTT AATTTGTTGT TGAACTAG
|
|---|
| Protein sequence | MGLTIYGNVF SLDAHRARSR RSDLSDRGTF KRLISRIEPD AGEPAVLDML RDYRRANRLR
TVNQARQNAN AGISTIQVAE QALRETESAL QRIQEITSRP LDGEPVEGSK RAKYDQEVAQ
LVRDIDGLAG ESQRHSMRLM RGGLSSHSFA VGVDQPEEIC FTVDDTSSAQ MGVEASVAWD
DPQLALDALA NIHRAMNRVA QVRQELDQVH NRFNTVLERL SSLSEQALTE RRGIESAQEA
ETVVAGLHSA LSQQAEAAIT MQANQHTMLV NLLLN
|
|---|
| |