| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0072 |
|---|
| Symbol | |
|---|
| ID | 4483642 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | + |
|---|
| Start bp | 77939 |
|---|
| End bp | 78754 |
|---|
| Gene Length | 816 bp |
|---|
| Protein Length | 271 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 639720818 |
|---|
| Product | flagellin domain-containing protein |
|---|
| Protein accession | YP_864007 |
|---|
| Protein GI | 117923390 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG1344] Flagellin and related hook-associated proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.18333 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTATGT ATATCAATAC AAATGTTGCA TCAAGCAATG CCCAACGACA GCTGTCGAAA
AGCACCAATG CACTTGCTAC GACTTTTGAG CGTCTCTCAT CAGGGCTGCG CATTAACAGT
GCTTCGGACG ATGCTGCCGG TTTGACGGTC TCCACCCGTA TGACCGCACA GATCCGTGGT
TTGAACCAAT CGGCCCGCAA TGCCAACGAT GGGATCTCCA TGGTGCAGGT GGCTGAGGGT
GCGTTGGCTG AAACCGAAGA TGCTTTGCAA CGCATGCGTG AACTGGCGGT GCAGGCAGCC
AGTGGCTCCT ATAACAACAC GGATCGTTCC GATTTGAATG ATGAGGTCAC GCAGCTCGTT
ACGGAGATCA CCCGTATCTC CACGGACACC AAGTTTAATG GGGTGTCGTT GATGAGCAGC
AACCAGACCT TCGATATTCA AGTGGGTGCC GATGTGGGTC AAAAGATCAC TGTCAGCACC
CAAGGTGCGG GTGCCTCGGC GCTGGGTGTG ACCACCGCCA GCATCACCTC GGCGGGTTTG
GCCAGCATCG CCATTGGTAA GATTGATGCC GCCATTGCCA GCGTATCGGA TATGCGCTCG
GTGTTGGGTG CGCAGCAGAA CCGTTTGGAG GCCGCCATTA CCAACTTGGA GAACGTCTCT
GAGCGCACCC AAGCGGCCCG TTCGCGCATC ATGGATGCAG ACATTGCCCA AGAGACGGCC
AATCTGACCA AGCAGTCGAT TTTGCAGCAA GCTGGCGCGG CGATGTTGGC ACAGGCTAAC
CAGCAGCCCC AGTTAATGTT GAGCTTGTTG CGTTAA
|
|---|
| Protein sequence | MSMYINTNVA SSNAQRQLSK STNALATTFE RLSSGLRINS ASDDAAGLTV STRMTAQIRG
LNQSARNAND GISMVQVAEG ALAETEDALQ RMRELAVQAA SGSYNNTDRS DLNDEVTQLV
TEITRISTDT KFNGVSLMSS NQTFDIQVGA DVGQKITVST QGAGASALGV TTASITSAGL
ASIAIGKIDA AIASVSDMRS VLGAQQNRLE AAITNLENVS ERTQAARSRI MDADIAQETA
NLTKQSILQQ AGAAMLAQAN QQPQLMLSLL R
|
|---|
| |