Gene Mmc1_0071 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_0071 
Symbol 
ID4483641 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp76171 
End bp77304 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content57% 
IMG OID639720817 
Productflagellin domain-containing protein 
Protein accessionYP_864006 
Protein GI117923389 
COG category[N] Cell motility 
COG ID[COG1344] Flagellin and related hook-associated proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0550639 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGGGT CGATGCGTGT GGGGTCCATA GCGGAAGGGG TGCGGATGAC CGGGGTGAAC 
ACCCCCGTGA GAGAGCCCAC GGCAGAGGTG CCAACGCAGA TTGAATGGAC CGGTCACGGC
GAGGGTGACG ACCGTGATCG AGAGACACGT GTACCTTGGG GTAGGGCGGC TCTTTATAAA
GTCCGCAGTA GGGATCGTTA TGGTATAGGG CTTGGGTCGG AGCGTGGTCA GGATCGTTGG
CCCATGACAC CTTGGAAGGA AGGCTTATTA GGAGAAAATA GCGACAGTGA GTCTCAGCGC
ATGAGCCGAG CATTTACGAT GTTTATGTAT CTCAATGCCT ATCGTGCGAC GGATCGTCTC
CAGCGCAAGC TGAAAAGCAG TAGCCAAGAG CTTGGTAAAG CCTATGTGCG GCTTGCGTCA
GGGTACCGTA TCAATGGTGC CTCTGACGAT GCCGCCGGTT TGGCGGTCTC CACCCGTATG
ACCGCACAAA TTCGTGGTTT AAACCAATCG GCCCGCAATG CCAATGATGG CATCTCGCTG
GTGCAGGTGG CCGAGGGTGC GTTGGTGGAG ACCGAGGCGG CTTTGCAGCG CATGCGTGAG
TTGGCGGTGC AGGCGGTCAG TGGGACTTAT ACCGACAGCG ACCGTTCTGA CCTGAATGAT
GAGGTCAGTG CGTTGATTTC GGAGATTACC CGCATCTCCA CCCAGACCAC GTTTAACGGT
GCGGTGCTGA TGAGCAGCAC CATGACCTTT GACATTCAAG TGGGTGCCGA TGTGGGGCAA
AAGATCACCG TGAGTACCGC CGCCGCAGGT GCCTCGGCGC TGGGTGTGAA CACGACCAGC
ATCACTTCGG TGGGTCTGGC GAGTGTTGCG ATTACCAAGA TTGATGCGGC CATTGCCCGT
GTATCGGATA TGCGTGCCGT GCTGGGTGTT CAGCAGAACC GTTTAGAGGC GGCTGTCCAC
AACCTAAGCA GCCTCTGTGC GCATACCGAG GTGGCCCGCG GGCGCATCAT GGATGTCGAT
ATGGCTCAGG AGACGGCCAA TCTGACCAAG CAGTCTATTT TGCAGCAGAC CGGGGCCGCC
ATGTTGGCAC AGGCCAATCA GCAGCCGCAG TTATTGTTGG GTTTGTTGCG TTAA
 
Protein sequence
MTGSMRVGSI AEGVRMTGVN TPVREPTAEV PTQIEWTGHG EGDDRDRETR VPWGRAALYK 
VRSRDRYGIG LGSERGQDRW PMTPWKEGLL GENSDSESQR MSRAFTMFMY LNAYRATDRL
QRKLKSSSQE LGKAYVRLAS GYRINGASDD AAGLAVSTRM TAQIRGLNQS ARNANDGISL
VQVAEGALVE TEAALQRMRE LAVQAVSGTY TDSDRSDLND EVSALISEIT RISTQTTFNG
AVLMSSTMTF DIQVGADVGQ KITVSTAAAG ASALGVNTTS ITSVGLASVA ITKIDAAIAR
VSDMRAVLGV QQNRLEAAVH NLSSLCAHTE VARGRIMDVD MAQETANLTK QSILQQTGAA
MLAQANQQPQ LLLGLLR