Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_0070 |
Symbol | |
ID | 4482391 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 75111 |
End bp | 75926 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 639720816 |
Product | flagellin domain-containing protein |
Protein accession | YP_864005 |
Protein GI | 117923388 |
COG category | [N] Cell motility |
COG ID | [COG1344] Flagellin and related hook-associated proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 49 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0971133 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCATTGT ATATTAATAC GAATATCGCA TCATCTAATG CTCAGCGTCA GTTGTTGAAG AGCACCAATG CTTTGGGTAA GACCTATGAG CGCCTCTCAT CGGGACTGCG CATTAATAGT GCTGCGGACG ATGCCGCCGG TTTGACCGTT TCTTCTCGCA TGACTGCGCA GATCCGTGGT TTGAACCAGT CGGCCCGCAA TGCCAACGAT GGCATCTCTT TGGTGCAGGT GGCCGAGGGT GCGTTGGCCG AGACCGAGGC GGCCTTGCAG CGCATGCGTG AGCTGGCGGT GCAGGCGGCC AGTGGTTCTT ATACCAATAC CGACCGTTCT GACCTGAATG ATGAGGTCAC GCAGCTTGTT TCGGAGATCA CCCGTATCTC CACGGACACC AAGTTTAATG GGGTGTCGTT GATGAGCAGC AACCAGACCT TCGATATTCA GGTGGGTGCG GATGCGGGTC AAAAGATCAC CGTCAGTACC ACCGCAGCGG GTGCCTCGGC GCTGGGTGTG ACCACCGCCA GCATCACCTC GGCGGGTTTG GCCAGTATCG CCATTGGTAA GATTGACGCC GCCATTGCCA GTGTATCGGA TATGCGTTCG GTGCTGGGTG CGCAGCAGAA TCGTCTGGAA GCGGCCATTA CCAACCTGAG CAATGTTTCT GAGCGCACCC AAGCGGCCCG TTCACGCATC ATGGATGCAG ACATTGCCCA AGAGACGGCC AATCTAACCA AGCAGTCCAT TTTGCAGCAG GCTGGGGCGG CGATGTTGGC GCAGGCCAAT CAGCAGCCTC AGTTAATGTT GAGCCTGTTG CGTTAA
|
Protein sequence | MSLYINTNIA SSNAQRQLLK STNALGKTYE RLSSGLRINS AADDAAGLTV SSRMTAQIRG LNQSARNAND GISLVQVAEG ALAETEAALQ RMRELAVQAA SGSYTNTDRS DLNDEVTQLV SEITRISTDT KFNGVSLMSS NQTFDIQVGA DAGQKITVST TAAGASALGV TTASITSAGL ASIAIGKIDA AIASVSDMRS VLGAQQNRLE AAITNLSNVS ERTQAARSRI MDADIAQETA NLTKQSILQQ AGAAMLAQAN QQPQLMLSLL R
|
| |