Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_0068 |
Symbol | |
ID | 4482389 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 72401 |
End bp | 73216 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 639720814 |
Product | flagellin domain-containing protein |
Protein accession | YP_864003 |
Protein GI | 117923386 |
COG category | [N] Cell motility |
COG ID | [COG1344] Flagellin and related hook-associated proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0535962 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCATGT CCATCATAAC CAATGTTGCG TCACTACAAG CGCAGCGCAA GCTATCCGGT ACCACCAACG CTCTGAGTCA GACCTATGAG CGGCTCTCTT CGGGGCTGCG TATTAATGGG GCTGCGGACG ATGCCGCCGG TTTGACAATC TCCACCCGCA TGACCGCTCA GATCCGTGGT TTGAACCAAG CTTCCCGCAA TGCCAACGAT GGGATCTCTT TGGTACAGGT GACGGAGGGT GCGCTTCAGG AGACCGAAGC GGCCTTGCAA CGTATGCGTG AACTGGCGGT GCAAGCCTCC AGCGCCACCT ACACCAACAC CGACCGTGCT GATCTGAATG ATGAACTGAC GCAGTTGGTT ACAGAAATCA CGCGGATTGC CACAGAGACC AAGTTTAACG GCATGGTGAT GTTGTCGGCC ACCCAGACCT ATGACATTCA GGTGGGTGCG GATGCGGGTC AAAAGATCAC CGTCAGTACC ACCGCAGCGG GTGCCTCGGC CCTGGGTGTG ACTGCGGCCA GCATCACCTC GGCGGGTCTG GCCAGTATCG CCATCGGTAA GATTGACGCC GCCATTGCCA GTGTATCGGA TATGCGTTCG GTGCTGGGTT CGCAGCAGAA CCGTTTGGAG GCGGCCATTG CCAACCTGGA TAACGTCTCT GAGCGCACCC AAGCGGCCCG TTCGCGCATC ATGGATGCAG ACATTGCCCA AGAGACGGCC AATCTGACCA AGCAGTCCAT TTTGCAGCAG GCTGGGGCGG CGATGTTGGC ACAGGCCAAC CAGCAGCCAC AGTTAATGTT GAGCCTGTTG CGTTAA
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Protein sequence | MSMSIITNVA SLQAQRKLSG TTNALSQTYE RLSSGLRING AADDAAGLTI STRMTAQIRG LNQASRNAND GISLVQVTEG ALQETEAALQ RMRELAVQAS SATYTNTDRA DLNDELTQLV TEITRIATET KFNGMVMLSA TQTYDIQVGA DAGQKITVST TAAGASALGV TAASITSAGL ASIAIGKIDA AIASVSDMRS VLGSQQNRLE AAIANLDNVS ERTQAARSRI MDADIAQETA NLTKQSILQQ AGAAMLAQAN QQPQLMLSLL R
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