Gene Mmc1_0068 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_0068 
Symbol 
ID4482389 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp72401 
End bp73216 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content58% 
IMG OID639720814 
Productflagellin domain-containing protein 
Protein accessionYP_864003 
Protein GI117923386 
COG category[N] Cell motility 
COG ID[COG1344] Flagellin and related hook-associated proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0535962 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCATGT CCATCATAAC CAATGTTGCG TCACTACAAG CGCAGCGCAA GCTATCCGGT 
ACCACCAACG CTCTGAGTCA GACCTATGAG CGGCTCTCTT CGGGGCTGCG TATTAATGGG
GCTGCGGACG ATGCCGCCGG TTTGACAATC TCCACCCGCA TGACCGCTCA GATCCGTGGT
TTGAACCAAG CTTCCCGCAA TGCCAACGAT GGGATCTCTT TGGTACAGGT GACGGAGGGT
GCGCTTCAGG AGACCGAAGC GGCCTTGCAA CGTATGCGTG AACTGGCGGT GCAAGCCTCC
AGCGCCACCT ACACCAACAC CGACCGTGCT GATCTGAATG ATGAACTGAC GCAGTTGGTT
ACAGAAATCA CGCGGATTGC CACAGAGACC AAGTTTAACG GCATGGTGAT GTTGTCGGCC
ACCCAGACCT ATGACATTCA GGTGGGTGCG GATGCGGGTC AAAAGATCAC CGTCAGTACC
ACCGCAGCGG GTGCCTCGGC CCTGGGTGTG ACTGCGGCCA GCATCACCTC GGCGGGTCTG
GCCAGTATCG CCATCGGTAA GATTGACGCC GCCATTGCCA GTGTATCGGA TATGCGTTCG
GTGCTGGGTT CGCAGCAGAA CCGTTTGGAG GCGGCCATTG CCAACCTGGA TAACGTCTCT
GAGCGCACCC AAGCGGCCCG TTCGCGCATC ATGGATGCAG ACATTGCCCA AGAGACGGCC
AATCTGACCA AGCAGTCCAT TTTGCAGCAG GCTGGGGCGG CGATGTTGGC ACAGGCCAAC
CAGCAGCCAC AGTTAATGTT GAGCCTGTTG CGTTAA
 
Protein sequence
MSMSIITNVA SLQAQRKLSG TTNALSQTYE RLSSGLRING AADDAAGLTI STRMTAQIRG 
LNQASRNAND GISLVQVTEG ALQETEAALQ RMRELAVQAS SATYTNTDRA DLNDELTQLV
TEITRIATET KFNGMVMLSA TQTYDIQVGA DAGQKITVST TAAGASALGV TAASITSAGL
ASIAIGKIDA AIASVSDMRS VLGSQQNRLE AAIANLDNVS ERTQAARSRI MDADIAQETA
NLTKQSILQQ AGAAMLAQAN QQPQLMLSLL R