| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0054 |
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| Symbol | |
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| ID | 4482375 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 57757 |
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| End bp | 59304 |
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| Gene Length | 1548 bp |
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| Protein Length | 515 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639720800 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_863989 |
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| Protein GI | 117923372 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000236941 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.277951 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGCAGC GGTTGAGGGT TCGCTCATTA CGGTTCACGG TGTTGGCCAT GGCGGGGTTG
GTGGTTGTCG TGGTGGTGGT GTTTGGGTTG TTTGCTGTGG CGCAGTTGGG TACACAGCAA
ACGATGGAGC GGCAGCAGGG GCTAAAGGTT TTGGCGGCGG GTCTGCATGG GCAGTTGGAG
CGCATTTACA CGTTGGAGCG GCTGGGGGCG TATCACCGGG ATGAGGCGCA GCTATTGGCC
AGGGAGGCGG TGTTGGCCAT GGCTCTTGGT GAGGGGCGTG GTTTATGGCT GATGGATATG
AAGCTGCATA TGGTGGTGGA TAGCAGCAGG CCGACTTGGG TTGGTAAGGA TTTGGGGCGC
GTGGTGGATG CGCAGGGCAA GCCTTTTTTT AGGGATTTGG TGGGGGTCGT GCGTGGAGCG
GGTGAGGGGG GGGTGGTGTA TCGTTGGGGG GAGGGGGCGC AGGAGCGGCT GGTGTATGTG
AAGGGGTTTA AGCCGTGGGG TTGGGTGATT GGGGTTGAGG TGGGGTTGGG GGATATCACG
GTGTGGGGGG GTGGTTCTGG GTTGGTGGTG GGGTTGGGGG TATTGTTGTT GCTCGTGTTG
TGGATGATCG GCTCTATGGG GCACCTGTTA CGGCGGCAAT TGGGGGGTGA GCCAGAGCAT
GTGCAGAGGA TTTGCAGGGG GGTAGCGAAG GGGGATTGGG GGGCTGTAGG GGGTTATATC
GGGGAGAGTC AGGGGTTGGG GGTGGTGGGG GAATTACAGC GTATGCAGCG GCGGTTGATG
GGGGTGATGG CGCGGTTGCA GGGGGGTATT GAGGGGGTTG GGGGGTATGG TGAGCGGTTG
GCGCAGGGGT GTGATGCGTT GATGGGGCGG ACAGATGAGC AGGTGAGTAC ATTGCATGAG
ACGGTGGCGG CCATGGGGGC GATGACCCAC ACCATTGCGC AGAACAGCCA GCATGCGCAG
GGTGCGGAGG GGATTGCGCG GCGGGCCTAT GAGGGGGCGC AGTCGGGTGG GGTGGCGGTG
CAAGAGGCGG TGGAGGTGAT GCATCATATT GCGCAGAAGA TTGGCATTAT TGAGGAGATT
GCGCGGCAGA CCAATTTATT GGCGTTGAAT GCGGCGATTG AGGCGGCGCG GGCGGGGGAG
CAGGGCAAGG GTTTTGCGGT GGTGGCGGCG GAGGTGCGCA AGTTAGCGGA GCGCAGTCAG
TTGGCGGCGG CGGAGATTGG CACGCTTTCT GGTCGGACGG TTGGGGTTGT GGAGCGGGCG
GGGGGGTTGA TTGCGGCGTT GGTTCCGCAG ATTCAGCAGA CGGCGGATTT GGTGGCGGAG
ATTGCGCGTA CCAGTGAGGA GCAGAGTCAG GGGGTTGGGC AGGTTAATGA GGCGGTTCAG
CAGATGGAGG GGGGGATTGA TCACAATGTT GTGTTGTTGC AGCAGGTTTC TGAAATGGTG
ACGGGCTTAA TGGGGCAGGT GGAGCAGATG GAGCGGGATT TAGGTGTCAA GCATAGGGGC
GGGCGGTTTG GTCCACAGGC GCTGGGGTGT AAACCATACC TCCCCTAA
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| Protein sequence | MLQRLRVRSL RFTVLAMAGL VVVVVVVFGL FAVAQLGTQQ TMERQQGLKV LAAGLHGQLE
RIYTLERLGA YHRDEAQLLA REAVLAMALG EGRGLWLMDM KLHMVVDSSR PTWVGKDLGR
VVDAQGKPFF RDLVGVVRGA GEGGVVYRWG EGAQERLVYV KGFKPWGWVI GVEVGLGDIT
VWGGGSGLVV GLGVLLLLVL WMIGSMGHLL RRQLGGEPEH VQRICRGVAK GDWGAVGGYI
GESQGLGVVG ELQRMQRRLM GVMARLQGGI EGVGGYGERL AQGCDALMGR TDEQVSTLHE
TVAAMGAMTH TIAQNSQHAQ GAEGIARRAY EGAQSGGVAV QEAVEVMHHI AQKIGIIEEI
ARQTNLLALN AAIEAARAGE QGKGFAVVAA EVRKLAERSQ LAAAEIGTLS GRTVGVVERA
GGLIAALVPQ IQQTADLVAE IARTSEEQSQ GVGQVNEAVQ QMEGGIDHNV VLLQQVSEMV
TGLMGQVEQM ERDLGVKHRG GRFGPQALGC KPYLP
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