| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0050 |
|---|
| Symbol | |
|---|
| ID | 4482618 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | + |
|---|
| Start bp | 52041 |
|---|
| End bp | 53543 |
|---|
| Gene Length | 1503 bp |
|---|
| Protein Length | 500 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 639720796 |
|---|
| Product | Fe-S oxidoreductase |
|---|
| Protein accession | YP_863985 |
|---|
| Protein GI | 117923368 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0247] Fe-S oxidoreductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00237763 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.450022 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCTGACG ACATCCATGT ACCGGAAATT GGTGACGACA TTGTAACCCC AGCCCCTGTG
GTTGGGACGA TGAGCCATCT CAAGCCCATT CCGGCCCAAG CCAAGCATAT GGAGCCGCTG
GATTTCCCCG GAGAGCGGGT GGAAAATTGG CAGCAGGCAG GCATTGAAAA ATTTGGGGAT
CTGCTCTCCA AATACCGTTC TTTGCAGGTG TTTATGGACA TCTGCGTAAA GTGCGGCTCC
TGCACCGATA AGTGCCATTA CTATCTGGGC ACGCAAGATC CCAACAACAT GCCGGTGCAG
CGCGCCGAGC TGATGCGCGA GGTCTATCGC CGTTACTTTA CACCGGGTGG CAAGCTGTTC
CCCAGTTTGG TGAAGGCGTC GGACTTTAAT GAAGAGACTC TGGAGAAGTG GTTTACCTAT
TTCCACCAGT GTTCCCAGTG TCGCCGTTGT TCGGTCTTTT GCCCTTACGG TATTGACACC
GCCGAAGTGA CCATGGCGGC CCGTGAGCTG ATGGACAGCA TTGGCGTGGG TCATAAGTAT
TCTGCGGAGA TCGTGGGTAA GGTACATGAT CTGGGCAATA ACTTGGGCAT TCCTAAACCC
GCGCTCAAGG GTACTTTGGA CTTTTTGGAA GATGATATCC TAGAGACCAC CGGTCATGAG
GTACGTCTAC CCCTGGATCA AAAGGGTGCT GAGGTTCTGT TGGTACCGCC TTCAGCGGAC
TTTTTCTCAG CCCCGCATGT GGATTCGTTG ATGGGCTATG CCAAGGTGTT TCACCAGGCT
GGTATTAGTT ACACCATCAG TTCGGTTGCT TCCGAGGCGG CCAACTTTGG CATGTTTATC
GGCAACTTTG ACCAGATGCA GAAGATCGCC AAGCGCATTA GCGATCAGGC TCGCGAGCTG
GGTGTCAAGC GTATTGTGGT GGGTGAGTGT GGCCATGCGT GGCGGGTGGC TTATGCCTTC
TGGAACACGT TGAATGGTCC CTTTGACTAT CTGGATCCCC GCTATCCCGT GCCCCAACAT
ATTTGTGAGT TTACCAACGA TCTGTACAAC CGTGGTGCGT TGACCATGGA TCGTAGCGCC
AACGATGACA AGATCATCAC CTTCCACGAT TCCTGTAACG TGGCGCGGGC CTCACGCATG
GGACCCAATC CCGGTGGTCA GTTTGAGATT CCCCGCGCTT TGATTCGGGC CTCGGCCAAC
CGGTTTGTGG ATATGGATCC TGACACCATT CACGAAAAGA CCTTCTGCTG TGGTGGTGGT
GGTGGTCTGT TGACCGACGA GTTGATGGAT CTGCGTATTA AGGGTGTGAT GCCACGGGTG
ACAGCTCTGA AAAAGGTGAT GGAAGAGGAT AATGTCAACT TCCTGGCCCT AATTTGCGCC
ATTTGTAAAG CGCAGTTTAC CAAGGTTCTT CCCTACTATG GTATCCCCAT GGATACGGTG
GGTGGGGTGC ATCAGCTGGT GAGTAATGCC ATTCAGTTGG GTGCTAAGAA GGGTATTGTT
TAA
|
|---|
| Protein sequence | MADDIHVPEI GDDIVTPAPV VGTMSHLKPI PAQAKHMEPL DFPGERVENW QQAGIEKFGD
LLSKYRSLQV FMDICVKCGS CTDKCHYYLG TQDPNNMPVQ RAELMREVYR RYFTPGGKLF
PSLVKASDFN EETLEKWFTY FHQCSQCRRC SVFCPYGIDT AEVTMAAREL MDSIGVGHKY
SAEIVGKVHD LGNNLGIPKP ALKGTLDFLE DDILETTGHE VRLPLDQKGA EVLLVPPSAD
FFSAPHVDSL MGYAKVFHQA GISYTISSVA SEAANFGMFI GNFDQMQKIA KRISDQAREL
GVKRIVVGEC GHAWRVAYAF WNTLNGPFDY LDPRYPVPQH ICEFTNDLYN RGALTMDRSA
NDDKIITFHD SCNVARASRM GPNPGGQFEI PRALIRASAN RFVDMDPDTI HEKTFCCGGG
GGLLTDELMD LRIKGVMPRV TALKKVMEED NVNFLALICA ICKAQFTKVL PYYGIPMDTV
GGVHQLVSNA IQLGAKKGIV
|
|---|
| |