| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0044 |
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| Symbol | |
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| ID | 4482612 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 46312 |
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| End bp | 47529 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639720790 |
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| Product | succinyldiaminopimelate transaminase |
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| Protein accession | YP_863979 |
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| Protein GI | 117923362 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | [TIGR03538] succinyldiaminopimelate transaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCCTG AAATGGCGCG TCTCAACCCC TATCCGTTTG AGAAGCTGGC GGTTTTGTTT
GAGGGAATTA CCCCCAATGG GGCGTTATCC CCTCTGAACA TCTCCATTGG TGAGCCCAAG
CATCCCACGC CGGCGTTTGT AACCCAGCGT ATGATGGAGG CGTTGCAGGA TGGGGATATG
GCCAAATATC CCACCACCCG AGGGGAGCGA GCCCTGCGTG AAAGCATGGC GGCTTGGTTG
ACCCGCCGTT TTGAACTGCA AGCGGGCAGT GTGGATCCCG ACCGGCATGT GCTGTCGGCC
AATGGCACCC GTGAGGCGAT TTTTTCGGTG GCGTTGGCGG TGGTGGATCG GGCCAAGGGG
GGGGTGGTAT TGACCCCCAA CCCCTTCTAC CAGATCTATG AGGGGGCCTG TTTTATGGCG
GGGGTGGAGC CTGTCCATAT TGACGCCACG GAAGAGACCC ATTTGCGCCC CCCCTTTACC
CAGTTGGATG CCGAGTTGTT GGCGCGTACG CAGATGGTCT ATCTCTGCTC CCCATCCAAC
CCCACCGGGG CGGTGCATCC GTTGGAGGAG TTGCAGGAGC TCATTCGGCT GGCGGATACC
TACGATTTTG TGATCTGTGC CGATGAGTGC TACTCGGAGA TCTGGTATGA TGCCCCGCCG
CCGGGATTGT TGCAGGCGTG TGCGGCCATG GGTCGGCACG ATTTTGCCCG CTGTTTGGTG
TTTCACTCCC TCTCCAAGCG TTCCAACATG CCGGGGGCCC GCACCGGTTT TATCGCCGGG
GATGCCCAAC TGTTGGACCA CTACTTTAAG CTGCGCACTT ACACCGGTTG TGCCACACCG
CCGTTTATTC AAAAAGCGGC CATCGCCGCC TGGGATGATG AGCAGCATGT GGAGGAGAAT
CGGCGGGCCT ACCGGGCCAA GCTGGAGGAG TCCATGGCGA TTCTCTCACC GGTTTTGCCC
GTGACCCGCC CCGAGGCCAG TTTTTATCTA TGGCTCAAGG TACCCGGTGG CGGTGCGTTG
TTTGCCCGCA CTCTCTACGA AAAATATAAT GTGGTGGTGC TGCCCGGCGG CTATTTGGGG
CGTCAAGGGG CCCATGGTAA CCCGGCGGAT GGGTATATCC GTATTGCCCT AGTGGCGACG
TTAGAGCAAA ATCGGGAGGC GATGCATCGC ATTGCCCAGT GCGCTCAAGA GATGATAGGG
CAGTCCCAGG CTGTTTAA
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| Protein sequence | MNPEMARLNP YPFEKLAVLF EGITPNGALS PLNISIGEPK HPTPAFVTQR MMEALQDGDM
AKYPTTRGER ALRESMAAWL TRRFELQAGS VDPDRHVLSA NGTREAIFSV ALAVVDRAKG
GVVLTPNPFY QIYEGACFMA GVEPVHIDAT EETHLRPPFT QLDAELLART QMVYLCSPSN
PTGAVHPLEE LQELIRLADT YDFVICADEC YSEIWYDAPP PGLLQACAAM GRHDFARCLV
FHSLSKRSNM PGARTGFIAG DAQLLDHYFK LRTYTGCATP PFIQKAAIAA WDDEQHVEEN
RRAYRAKLEE SMAILSPVLP VTRPEASFYL WLKVPGGGAL FARTLYEKYN VVVLPGGYLG
RQGAHGNPAD GYIRIALVAT LEQNREAMHR IAQCAQEMIG QSQAV
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