| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0042 |
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| Symbol | |
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| ID | 4482610 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 44151 |
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| End bp | 45026 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639720788 |
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| Product | peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysins |
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| Protein accession | YP_863977 |
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| Protein GI | 117923360 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1876] D-alanyl-D-alanine carboxypeptidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCAAC GACGTCAATT TTTGCAGGCT ATGGCTGTAG GGGTATTCGG TGGAGCAGGA
ATGGTCGCCA CAGAGGCCCA TGCCATCGAA AAAGCTGTGC CCATGCCAAA AAAGACCGAG
GCTTATCTGC GTGCCTCCAT GGACCAAGCG GAGATCGAAG AGGCGGTGCG TCGCATCCGT
AACTTCAATA CCGCCCATAA AGACGATATT TTCCTCTCTC CCGCTCAATT TGCTACCCTA
AAAAAGGTGA ACATTCGCTT TACCCGGCTG GAAAATCTGG TCGGTCATGC CAATTTTCAC
CTGTTGGGCT TTGATGAAGC GATCAACCTG GCGAAAAATT TTAGCTCGGT GGAGTCCTTC
TCCAAGGCTG AGCTGGATTT TCTGGAAGAG CTCTTTTTCC GCGATGCCGG TGCCTATGGC
TTTAACGGCT ACAAGCCCTT TACCCGTCTG ACCGAAGAGA TCCCCAAACG AGAGGTCAGC
AAGTTGCCCT TCACCGGCAA CTATCTCTAC CGGGGCACCC CCGTACAGAC CTACAATAAA
ATTCTCCGCG ATGTGGGGGA TAAGGTTATC CTTACCTCTG GTGTACGGAG CGTGATCAAG
CAATTCCGTC TCTTTTTGCA CAAAGCCGAA GAGAGTCAAG GCAACCTCTC CATGGCCTCC
CGTTCGCTGG CCCCGCCGGG TTACTCTTTC CACGGTATCG GCGATTTTGA TGTGGGGCAG
GTGGGCTTTG GCTATCTTAA CTTTACCGAG CACTTTGCCA CCACCGAGGT GTTTAAGCGT
CTGCGGGATC TCGGTTATGT CAACCTGCGC TACCCCCGCG ACAACCTACT TGGGGTGCGT
TTTGAACCCT GGCACATCAA GGTATTGTCG GTCTGA
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| Protein sequence | MMQRRQFLQA MAVGVFGGAG MVATEAHAIE KAVPMPKKTE AYLRASMDQA EIEEAVRRIR
NFNTAHKDDI FLSPAQFATL KKVNIRFTRL ENLVGHANFH LLGFDEAINL AKNFSSVESF
SKAELDFLEE LFFRDAGAYG FNGYKPFTRL TEEIPKREVS KLPFTGNYLY RGTPVQTYNK
ILRDVGDKVI LTSGVRSVIK QFRLFLHKAE ESQGNLSMAS RSLAPPGYSF HGIGDFDVGQ
VGFGYLNFTE HFATTEVFKR LRDLGYVNLR YPRDNLLGVR FEPWHIKVLS V
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