| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0028 |
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| Symbol | |
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| ID | 4480714 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 31230 |
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| End bp | 31943 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639720774 |
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| Product | DNA polymerase III, epsilon subunit |
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| Protein accession | YP_863963 |
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| Protein GI | 117923346 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
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| TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family
[TIGR01406] DNA polymerase III, epsilon subunit, Proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAGAGAT TGATCGTTCT GGATACAGAA ACCACCGGCT TTGATCCCAA AGAGGGCCAC
CGCATTATTG AAATCGGTTG TGTTGAACTG GTCAATATGC GCAAAGGGGA TGAACGGCAA
TGGTATGTCA ATCCCGAGCG GGAGATACCC GCTGACGCCA CCAAAGTACA CGGTATTACC
GATGCCGATG TGGCCAACAG CCCAAAATTT AAGGAAATAT ACCACGAATT TTTGGCCTTT
ATCGGCGAGG ATAGCTTGGT TATCCACAAC GCCGAATTTG ATATGCGCTT TTTAAATGCC
GAACTTACCC GTCTGAATAA ACGCTTGGTC ATGCCCATGG AACGGGCCAT TGATACCATT
CCCTTAGCCC GGCGTAAATT TCCCGGCTCC ACGGTCAACC TGGATGCCCT GTGTAAACGG
TTGGGGGTTG ATAACTCGGG ACGGACCTTC CACGGCGCAC TGCTGGATGC CCACCTATTG
GCAGAAGTCT ATGTGGAGCT GATGGGGGGC AACCAGTTTA GTTTAGAGAT GGCCGCCGAT
GAGAGCGGCC GAATTGCGCA GCCGTCGGAT AGCCCAAAAG ATGGCGCACC CGGTCCAGGG
CTGATGATGG CTCCCCGCGA CTGGCAGGTG AGTGAAGAGA GCACGCAGGC CCATGAGGCC
TTTTTGCAGT TGTTGGACAG AGAGTCCGGC GGTGCAGTGT GGAACAAAAA CTAG
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| Protein sequence | MERLIVLDTE TTGFDPKEGH RIIEIGCVEL VNMRKGDERQ WYVNPEREIP ADATKVHGIT
DADVANSPKF KEIYHEFLAF IGEDSLVIHN AEFDMRFLNA ELTRLNKRLV MPMERAIDTI
PLARRKFPGS TVNLDALCKR LGVDNSGRTF HGALLDAHLL AEVYVELMGG NQFSLEMAAD
ESGRIAQPSD SPKDGAPGPG LMMAPRDWQV SEESTQAHEA FLQLLDRESG GAVWNKN
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