Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_0027 |
Symbol | |
ID | 4480713 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 29839 |
End bp | 31230 |
Gene Length | 1392 bp |
Protein Length | 463 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639720773 |
Product | protoporphyrinogen oxidase |
Protein accession | YP_863962 |
Protein GI | 117923345 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1232] Protoporphyrinogen oxidase |
TIGRFAM ID | [TIGR00562] protoporphyrinogen oxidase |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAAAAA ATCCCATTCT TATCATCGGC GGCGGTATCT CCGGTCTCTC CACAGCCTGG TTTCTGCATA AAAAGGGAGA AAAAGTCATA TTGCTGGAGT CCCGTGACCG CGTGGGCGGT AATATACGCA CCAGCCGTAA CCCGGAAGGC TACCTGATCG AACACGGACC CAACTCCACC CTGCAAAAAC CCGGCGACGA AGAAGATGCC TTGGGCCGTA TCATCACAGA TATGGCGTTG GAATCCGAAC TTCAAGAAGC CAACCCCCTA GCCGCCCGCC GCTTTGTTAT GAAAGGGGGT CAACTGCATG TGCTGCCAAC CTCCCCACCA GGATTTATAA AAACACCCCT GTTTTCCCTC TCTGCCAAAC TACGCTTATG CCTGGAGCCC TTTATCGGTA AGAGCGAACA AGAAGAGAGT ATTGCCCAAT TTGTCATCCG ACGTTTGGGT CAAGAGTTCC TCGATTACGC CATTGAACCC TTTGTCTCTG GCGTCTACGC AGGCGACCCT AAACAGCTCT CTGTACGGGC CGCTGTGGCT AAAATCTATG CGCTCGAAGC CAAATATGGC TCCCTGATTA AAGGGGCCAT CGCCCTGGGA AAAATCCGTA AAGCCGCCGG CATGCCCCGT GGACGCATGA TCTCTTTTGA GACAGGTATG GAAACTCTGC CCGCCACCAT CGCGAACAGG TTGCCCCACC AGAGCATCCA CACCAACGCC CAAGTAACCG CCCTCTGCCA ACATGGCGCT GCGTGGCAGG TTAGCTGGCA ACAAGGGGGG CAACACGGGG GTGAACCCCA CAGCATCATC GCCTCCCAAG TGGTGCTGGC CACTCCCGCT TCAGTCTCCG CCCAACTGCT GCGCCCCCTA AGCCCTCAAG CCGCAGACCT GCTGGAGAGC ATCCGCTACG CCCCTGTGGA TTCGGTGGCC CTGGGCTATG CCAAACAAGA TATAAACCAT TCTCTCGATG GATTTGGTTT TTTAATACCA CGAAAAGAGC AGGTTACAAC CCTTGGTGGA CTCTTTTCCA CCACCCTGTT CCCAGGTCGA GCTCCCCAAG ATAAAGCGCT GCTCACCTGC TTTATCGGGG GTATGACCAA CCCCTCCATC ACCCAATGGT CAGAGGAGAA GGTGGTGACT CAGGTGGATC AGGATATGAT GGCCGCCCTA GGCATCCAAC ACGGGGCCGA ATATGTCCAC CTAACCCGCT ATACTCATGC CATCGCCCAA TATGAACAGG GCCATTTGCA ACGGGTAGGG GATATTGATA GGGCATTGGC AGGCTACAAA GGGCTGCATT TGCGTGCTAA CTGGCGGGAT GGGGTGAGCG TATCCGACTG TGTATTAAAC GGCGAGAAGA GCGCACAGAA GATCCTAGCG GGGGTTTCCT GA
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Protein sequence | MTKNPILIIG GGISGLSTAW FLHKKGEKVI LLESRDRVGG NIRTSRNPEG YLIEHGPNST LQKPGDEEDA LGRIITDMAL ESELQEANPL AARRFVMKGG QLHVLPTSPP GFIKTPLFSL SAKLRLCLEP FIGKSEQEES IAQFVIRRLG QEFLDYAIEP FVSGVYAGDP KQLSVRAAVA KIYALEAKYG SLIKGAIALG KIRKAAGMPR GRMISFETGM ETLPATIANR LPHQSIHTNA QVTALCQHGA AWQVSWQQGG QHGGEPHSII ASQVVLATPA SVSAQLLRPL SPQAADLLES IRYAPVDSVA LGYAKQDINH SLDGFGFLIP RKEQVTTLGG LFSTTLFPGR APQDKALLTC FIGGMTNPSI TQWSEEKVVT QVDQDMMAAL GIQHGAEYVH LTRYTHAIAQ YEQGHLQRVG DIDRALAGYK GLHLRANWRD GVSVSDCVLN GEKSAQKILA GVS
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