| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0013 |
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| Symbol | |
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| ID | 4480640 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 13357 |
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| End bp | 15993 |
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| Gene Length | 2637 bp |
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| Protein Length | 878 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639720759 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_863948 |
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| Protein GI | 117923331 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGGTA ATGAGATCCG TAAAAGGTTT GTAGCGTTTT TCCAACAACA TGGGCATACC
CATGTGGAAT CCTCCAGCCT GGTGCCGCGC AACGACCCCA CCCTACTTTT CACCAACGCC
GGTATGGTGC AGTTTAAAAG TCTTTTTTTG GGCGAAGAGC GGCGGGATTA CAGCCGCGCC
GTCAGTGCGC AAAAATGCGT GCGTGCCGGG GGTAAGCATA ATGATCTGGA GAATGTGGGG
CGTACCGCCC GCCACCACAC TTTCTTTGAG ATGCTGGGTA ACTTCTCTTT TGGAGATTAT
TTCAAGGAGG AGGCGATCCG CCTGGGCTGG CGCTTTGTCA CCGAAGATCT GGGTATTGAT
GCCCAGCGCC TGCTGGTCAC GGTCTATAGC GAAGATGACG AAGCCTATGC CATCTGGACC
CAACAGATCG GCCTGCCCGC TGACAAGGTG ATCCGTATAC CCACCACCGA TAACTTTTGG
TCCATGGGCG ATACCGGCCC TTGCGGCCCC TGTAGTGAAA TTTTCTATGA CTATGGCGAC
ACCGTAGCGG GGGGTCCCCC TGGCTCGGAA GATGAGGATG GTGATCGCTT TGTCGAGATC
TGGAACTTGG TCTTTATGCA GTATGACCGC AGCAGCGACG GTACCTTAAC CCCCCTGCCC
AAACCCAGCA TTGATACTGG TGCCGGGCTG GAACGGCTGG CTTCGGTGCT GCAAGGCAAG
ACCAACAACT ATGATACCGA CCTTTTTCAG CCTCTTATCA AGGCCGCTGC GGCTTTGGCG
GGGGTGGATG ATACCACATG CTCGGCGGAG CAGTTGGTCT CATTGCGGGT GATTGCCGAC
CATATTCGTT CGGTCAGTTT TTTAATTGCC GACGGTGTGT TGCCCTCCAA CGAAGGGCGG
GGTTACGTGT TACGCCGCAT CATGCGGCGG GGCATGCGCC ATGGCCGCCT GCTGGGGCTA
GAACAGCCCT TTATGCACAA GTTGGTGGAG ACGTTAGGGG CATTGATGGG GGATACCTAT
CCTGAGCTTA CCGCCCAACG TAAAACCTTG GCGATGGTGA TTGAGACCGA AGAGAAGCGC
TTTGCTGCGA CTTTGGGCAC GGGTCTTAAA CATTTGGAGG AGGCGGTCGC AGGTCTGCGT
ATGGGGGATG TGCTGGATGG CAAGACCCTT TTTACCCTTT ACGACACCTT TGGTTTCCCG
CTGGATTTGA CGGCGGACAT CCTGCGTGAT CGTGAGATTG GGGTGGATCA GGAGGGCTTT
AGCGCTTGCA TGAAAGAGCA GCGGGAGCGT GCCCGCGCCG CATGGTCGGG CAGTGGTGAG
GCCAGTCTGG GCGCCCTTTA TCATCCGCTG TTGGAGCGTG TGGGAGCCAG TGAGTTTTTG
GGATATGTGC ATGAATCAGC CTCGGCCAGT GTGGTGGCCT TGATTAAAAA CGGGGCTGAG
GTGGAGAGTC TGACGGCGGG GGATGAGGGC TCCGTGGTCT GCAACCAGAC CCCCTTTTAT
GGGGAGTCCG GTGGCCAAGT GGGGGATCGG GGTGTGATTC AGTTGGCCAA TGGTGCCCGC
TTTACCGTGA CCGATACGCA AAAGCCCCTG CCCGATTTGA TTGTACACCA TGGTAAAATG
GTCACTGGTA CGGTGCATCT TGGGGATCAT GCCGAGTTAC AGGTAGATGG CGCAACCCGT
CAGGCGATTC GTCTGCACCA CTCGGCTACC CATTTGATGC ACCATGCGCT ACGGGCGGTG
TTGGGGGAGC ATGTTAAGCA GGCGGGCTCG CATGTGAGCG CGGAGCGTTT ACGTCTCGAT
TTTTCTCACT TTCAGGGGAT GAGTGAAGAG GAGTTGCGGG CGGTGGAGGA TCGGGTCAAT
GGGGCGATAT TGAGCAATGT CAGCCAAGAG ACCGCCGTGA TGACCCCGCA AGAGGCGGTG
GCCGCAGGGG CCATGGCGCT GTTTGGGGAG AAGTATGGGG ATGAGGTGCG GGTGGTCCGT
ATTGGCGACA GCATGGAACT CTGTGGGGGT ACCCACGTAA GCCGCAGTGG GGATATGGGT
ATCTTTCATA TCCTCTCTGA GAGCGCTGTG GCTGCCGGTG TACGCCGTTT AGAGGCGGTG
TGTGGGGGAC GTGCCCGAGC CATCTTCCGT GGCGACCAAG AGGCGCTCAA GGCCGCGGCT
GCGCTCTTGA AGACACAACC GAATAAACTG GCTGAGGGTA TTGAGCGTCT TTTGGGCAAG
CAGAAAGAGT TGGAGAAGAG TTTAGAGAAG CTGCAATCGG CGCAGGCGGG GGGCATGGTA
GAGGCGTTGT TGGAGCAGGC TGTCGAGGTT GGCGGTATTA AACTGCTGGC GGTAGAGGTT
AAGGGGGTTG ATGGCAAGGC GCTACGGGAG ATGGTGGACC AAGTTAAGGA TAAGCTGGGT
TCAGGGGTGA TTCTGTTGGC GTTGGGAGGG GATAAGGTCT CGTTGGTCGC TGGTGTGACC
AAGGATTTGG CGGGCAAGCG GGTCAAGGCG GGGGATTTGA TGGCCTTTGC CGCCGCCATG
GTGGGGGGCA AGGGTGGAGG TCGTCCAGAC ATGGCGCAGG GGGGTGGTAC CGAGGTTGCG
GCTATCCCCA CCATGTTGAC CGCGATTCCT GGTTGGTTAC AGGAACAGCT TGGCTAA
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| Protein sequence | MNGNEIRKRF VAFFQQHGHT HVESSSLVPR NDPTLLFTNA GMVQFKSLFL GEERRDYSRA
VSAQKCVRAG GKHNDLENVG RTARHHTFFE MLGNFSFGDY FKEEAIRLGW RFVTEDLGID
AQRLLVTVYS EDDEAYAIWT QQIGLPADKV IRIPTTDNFW SMGDTGPCGP CSEIFYDYGD
TVAGGPPGSE DEDGDRFVEI WNLVFMQYDR SSDGTLTPLP KPSIDTGAGL ERLASVLQGK
TNNYDTDLFQ PLIKAAAALA GVDDTTCSAE QLVSLRVIAD HIRSVSFLIA DGVLPSNEGR
GYVLRRIMRR GMRHGRLLGL EQPFMHKLVE TLGALMGDTY PELTAQRKTL AMVIETEEKR
FAATLGTGLK HLEEAVAGLR MGDVLDGKTL FTLYDTFGFP LDLTADILRD REIGVDQEGF
SACMKEQRER ARAAWSGSGE ASLGALYHPL LERVGASEFL GYVHESASAS VVALIKNGAE
VESLTAGDEG SVVCNQTPFY GESGGQVGDR GVIQLANGAR FTVTDTQKPL PDLIVHHGKM
VTGTVHLGDH AELQVDGATR QAIRLHHSAT HLMHHALRAV LGEHVKQAGS HVSAERLRLD
FSHFQGMSEE ELRAVEDRVN GAILSNVSQE TAVMTPQEAV AAGAMALFGE KYGDEVRVVR
IGDSMELCGG THVSRSGDMG IFHILSESAV AAGVRRLEAV CGGRARAIFR GDQEALKAAA
ALLKTQPNKL AEGIERLLGK QKELEKSLEK LQSAQAGGMV EALLEQAVEV GGIKLLAVEV
KGVDGKALRE MVDQVKDKLG SGVILLALGG DKVSLVAGVT KDLAGKRVKA GDLMAFAAAM
VGGKGGGRPD MAQGGGTEVA AIPTMLTAIP GWLQEQLG
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