| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0010 |
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| Symbol | |
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| ID | 4480637 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 10733 |
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| End bp | 11533 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639720756 |
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| Product | flagellar biosynthetic protein FliR |
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| Protein accession | YP_863945 |
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| Protein GI | 117923328 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1684] Flagellar biosynthesis pathway, component FliR |
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| TIGRFAM ID | [TIGR01400] flagellar biosynthetic protein FliR |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGATCCTG CCGCCATGAT GGATTTTTTT GGCTTCACCA TTGGCGAGGT GGAGCGCATG
GTGCTGATCA TGTCCCGTCT TTCGGGGCTC TTTTTGGCCG CCCCCTTTTT CTCCCGCAAT
GTTGGGCCCA AACGTATTCG GGTGATACTG TTATTATGGA TCACCATCGT GATCTACCCC
ATCGTTCCAC CCTGGCCGGG GGAGGGCAAT GGCGAGGTGA TACGCATGGT CTTTACGGGC
GTGGTGGAGT TTAGCATGGG CATCATGATC GGGATGATCG CCCATTGGGT ACTGGTGTCG
GTACAGATTG CGGGTACCAT GATCGGCTTT GAGATGGGTC TCTCCATGGC AATGGTGATG
GACCCTACCT CGGGCGTGCA GGAAGGCGTT TTAGCTAACC TTTTATATCT TTTTGGGTTA
ATGCTTTTTT TACTGCTCAA TGGCCACCAT TGGCTATTAG AAGGGCTGGC CCGCTCGTTT
GTGAGCATGC CATTGGGCAG CCCTTTGCCC CATGGTGAAC CCATGATTAC CATTGTATTA
CAGGGTATTG TACACATGTT TGAGCTGGCG CTGCTGCTGG CAGCCCCGGT GGTTGCGGCC
GCCAAGCTGC TCTATTTGGG CATGGGTTTG ATCAACCGTG CTTCACCGCA GATCCAGGTC
TTTTTTCTGG CCATGCCGGT GGCACAGTTG ATGGGATTTT TAATTATGGG ACTCACTCTT
TCCATTTTCG GGCAGCGTTT AACCCGCGAG ATGGAGCTGT TTATCAACCT TGCCTTCCGG
GTGGTTGGGC TTACGCCCTA G
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| Protein sequence | MDPAAMMDFF GFTIGEVERM VLIMSRLSGL FLAAPFFSRN VGPKRIRVIL LLWITIVIYP
IVPPWPGEGN GEVIRMVFTG VVEFSMGIMI GMIAHWVLVS VQIAGTMIGF EMGLSMAMVM
DPTSGVQEGV LANLLYLFGL MLFLLLNGHH WLLEGLARSF VSMPLGSPLP HGEPMITIVL
QGIVHMFELA LLLAAPVVAA AKLLYLGMGL INRASPQIQV FFLAMPVAQL MGFLIMGLTL
SIFGQRLTRE MELFINLAFR VVGLTP
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