| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_4390 |
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| Symbol | |
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| ID | 4476018 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008573 |
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| Strand | - |
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| Start bp | 276877 |
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| End bp | 277758 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639720745 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_863903 |
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| Protein GI | 117676327 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.262876 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCCGA CACTGGGATC TCTCAAGATA TTGATAGCGG CGGCTGAAAC GGGCTCCTTT
TCGGCGGCTG CACGCAAATT AGGCAAGGCG CAATCAGTGG TTAGCACCAC CATTTCCAAT
CTGGAGATCG ACCTTGATCT GACGTTGTTC GAACGAACAG GTCGTTATCC ACAACTGACA
CAAGCAGGTG TACGGATAGT ACAGGAGGCA GAGGTCTTGC TCGCCCAGAG TCAACGCTTA
CAGGCGATTG CAGGTGAGTT GGCTTCTGGT GTTGAGACAC GCCTGACTCT TGCTATCGAT
GATGACTCTC ACTTGCCATG GCTCGGCAGT TTGCTGGAGC ATTTTGCCAC TCGTTTTCCA
ATGGTAGAGC TGGAGTTGCT TTTTCCATTG ATGGAAGATG TCACTGATTT ACTACTAACT
GGCCGTGCTC AGCTTGGTAT ATGTTATAAA AACGAGAATC CCCATCGCGA GATTGTCACT
TACACACTGG GTGAAGTAGC TATGCCGATA GTGGTTTCTA CAGAACATCC GCTGGCTCGA
AAGCAGCCAC TGAATGAGAT CGACTTGCAA GGCTCACGAC AGTTGCTGGT TACTGGACGG
CGGGAGGGAA GCGAACGTCA GCGCTTTCGG CTCTCTGCGC AAGTGTGGTG GGTAGAAGGA
GACCTTGGGG TGATGGAATT CGTGAAACGG GGTTTGGGTT GGGCAGCAAT TCCTGCTTTT
TTAATCCAAG AGGCGCTGGC ACGTCAAGAA GTTGTGGTAC TGGAATCGGA CTTAATAAGC
CGTCATGCCC TGACGTTAGA ACTACAATGG CACCGCGCTT TAGCACTTGG ACAAGCTGGT
CGATGGCTCA AAGAAACCCT TCAGTCAAAA GTGCCTTTTT GA
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| Protein sequence | MNPTLGSLKI LIAAAETGSF SAAARKLGKA QSVVSTTISN LEIDLDLTLF ERTGRYPQLT
QAGVRIVQEA EVLLAQSQRL QAIAGELASG VETRLTLAID DDSHLPWLGS LLEHFATRFP
MVELELLFPL MEDVTDLLLT GRAQLGICYK NENPHREIVT YTLGEVAMPI VVSTEHPLAR
KQPLNEIDLQ GSRQLLVTGR REGSERQRFR LSAQVWWVEG DLGVMEFVKR GLGWAAIPAF
LIQEALARQE VVVLESDLIS RHALTLELQW HRALALGQAG RWLKETLQSK VPF
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