| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_4367 |
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| Symbol | |
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| ID | 4476027 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008573 |
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| Strand | - |
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| Start bp | 255706 |
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| End bp | 256713 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639720722 |
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| Product | phage integrase family protein |
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| Protein accession | YP_863880 |
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| Protein GI | 117676304 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATAACT ACACACCCAA ACTCACATCG GATTCGCCAT TACGTAGTGA GCAATCAGTT
TTGCCGTCGC TGGCAGAATC CGACTCACTG CGCCACTATC TGCAAGCGGC GACCTCCAAT
AACACGCGAA CAGCCTACCG TTCAGCGATT CGGCAGTTCG AAAAATGGGG CGGGCGGTTG
CCCACGGATC GGGATACCCT GGTGCGTTAC CTGGTGGCCA AGGCCGATGT GCTGAATAGC
CGGACTCTCG CCCTTCACCT CACGGCCGTT AGCCAATGGC ACCACTACCA AGGGTTGACT
GACCCGGTTC GTGATCCGCT GGTATGTAAA ACCATGGAGG GCATTCGCCG CACCCATGGA
CAGCCCAAGC GCAAGGCCAA GGCGTTGCGC TTGGAGCACA TCGCCCAACT AGTAAATTAC
TTGCGGCACT TACCGGACAA CAAAAAGAAA TACCGGGATA TTGCCTTGGT ACTCACCGGG
TTCTTCGGCG CCTTGCGTCG CAGTGAGCTG GTTGCTCTTC AGGTCAATGA TCTGGTTTGG
GAGCCGGAGG GGCTGCTCAT CCGGTTGCCG CGCTCCAAGA CCGACCAGCA AGGCATGGGT
TTAATGCGAG CTTTACCTTA CGGAAAGGCC GCTTGTTGTC CGGCTACCGC CGTGAAAACT
TGGTTAGATG CAGCGGGCAT CACCAGCGGT CCGGTGTTTC GTCCCACCAA CCGCTGGGAT
CACATTCAGG AAAAAGCGCT GGCTCCAGGT GCGGTCAATG CTTTGCTCAA AACGCTGGGG
CAAGCCTGTG AGTTTGATTT TGTGCCTGAA CTCAGTAGCC ACAGTTTCCG TAGAGGGTTA
TCCACATCGG CAGCGCGTGA GCGAGTGGAT TTTGAGTTGA TCAAGAAACA AGGCGGCTGG
AAGAGCGATG CCACCGTCTG GGAGTATATC GAGGAAGGCC AGCAGCTCAG CAATAATGCG
TCAATTATCT TAATGGAGAA GATGGCAACC CTGATGGATG CTGAATGA
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| Protein sequence | MDNYTPKLTS DSPLRSEQSV LPSLAESDSL RHYLQAATSN NTRTAYRSAI RQFEKWGGRL
PTDRDTLVRY LVAKADVLNS RTLALHLTAV SQWHHYQGLT DPVRDPLVCK TMEGIRRTHG
QPKRKAKALR LEHIAQLVNY LRHLPDNKKK YRDIALVLTG FFGALRRSEL VALQVNDLVW
EPEGLLIRLP RSKTDQQGMG LMRALPYGKA ACCPATAVKT WLDAAGITSG PVFRPTNRWD
HIQEKALAPG AVNALLKTLG QACEFDFVPE LSSHSFRRGL STSAARERVD FELIKKQGGW
KSDATVWEYI EEGQQLSNNA SIILMEKMAT LMDAE
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