Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_4357 |
Symbol | |
ID | 4476052 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008573 |
Strand | + |
Start bp | 242263 |
End bp | 243072 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 639720712 |
Product | hypothetical protein |
Protein accession | YP_863870 |
Protein GI | 117676294 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2856] Predicted Zn peptidase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.162656 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAAGAAC AAAAAGGAGC AATGGAGGCC GAATCTTTAC TTGAAGATCT GGGTTTTGAT CAGTTACCGA TCAAAGTAAT TCAATTTATT AATGCCGTTT CAGACGAAAG CTTTCCTATC AGAATGGAAT TCCATGCATT TGTATCCGAT CAGTTTTTAG GTAAGGCAAT CGGTAGTCAA GATGGGGCTG GAATTATTAT TAATAGCAAT ATTCCAGATT CTCGGCGGCT AAATTTCACT GCGGCACATG AAGCAGGCCA CGTTTGTATG CACATAATGC AAGGCTCCTC TCAAGATTTT GCGTGTGGCA ACTCTGAGCT TGGAGATTAT TTTAAAGATC CGCTCGAACG CCAAGCTAAT GGCTTTGCAT CTGGGCTACT AATGCCAAAG CGATTGGTTA AGTCTTTGAC TGATGGCGAC GTAAACTGGC ATAACATCAA ACAAATATCC GATCTATGCG ACACCTCTTT GGAGGCTGTT TTTAGAAGAC TATCATGGCT TGAGAAAGCG CCTGTGGCGA TGGTAATCCA CCAAAACAAG CAATTTAAGC GTTTTGTTCC TACAAAGCAT TTTAATTTTT ATATAAACCA AACTAACCTA TCCTCAGAGC AATTGGATTC TTGTACAAAT GTCAGCCAAG AGGCATTTCC TAGTGACTTT GACGTTGTAG ACCCGATAGA TTGGGTTACA CCAGAGCGAG ATGGCATGAA GTTACTGGAG TTATATGCAA GCTCAATTGT ACTCAAAGAC GGGTTTATTT ATACATTACT TAGTTACGAT GATGACTGCC TGGAAGAAGT TGACATCTAA
|
Protein sequence | MEEQKGAMEA ESLLEDLGFD QLPIKVIQFI NAVSDESFPI RMEFHAFVSD QFLGKAIGSQ DGAGIIINSN IPDSRRLNFT AAHEAGHVCM HIMQGSSQDF ACGNSELGDY FKDPLERQAN GFASGLLMPK RLVKSLTDGD VNWHNIKQIS DLCDTSLEAV FRRLSWLEKA PVAMVIHQNK QFKRFVPTKH FNFYINQTNL SSEQLDSCTN VSQEAFPSDF DVVDPIDWVT PERDGMKLLE LYASSIVLKD GFIYTLLSYD DDCLEEVDI
|
| |