Gene Shewana3_4357 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_4357 
Symbol 
ID4476052 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008573 
Strand
Start bp242263 
End bp243072 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content41% 
IMG OID639720712 
Producthypothetical protein 
Protein accessionYP_863870 
Protein GI117676294 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2856] Predicted Zn peptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.162656 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGAAC AAAAAGGAGC AATGGAGGCC GAATCTTTAC TTGAAGATCT GGGTTTTGAT 
CAGTTACCGA TCAAAGTAAT TCAATTTATT AATGCCGTTT CAGACGAAAG CTTTCCTATC
AGAATGGAAT TCCATGCATT TGTATCCGAT CAGTTTTTAG GTAAGGCAAT CGGTAGTCAA
GATGGGGCTG GAATTATTAT TAATAGCAAT ATTCCAGATT CTCGGCGGCT AAATTTCACT
GCGGCACATG AAGCAGGCCA CGTTTGTATG CACATAATGC AAGGCTCCTC TCAAGATTTT
GCGTGTGGCA ACTCTGAGCT TGGAGATTAT TTTAAAGATC CGCTCGAACG CCAAGCTAAT
GGCTTTGCAT CTGGGCTACT AATGCCAAAG CGATTGGTTA AGTCTTTGAC TGATGGCGAC
GTAAACTGGC ATAACATCAA ACAAATATCC GATCTATGCG ACACCTCTTT GGAGGCTGTT
TTTAGAAGAC TATCATGGCT TGAGAAAGCG CCTGTGGCGA TGGTAATCCA CCAAAACAAG
CAATTTAAGC GTTTTGTTCC TACAAAGCAT TTTAATTTTT ATATAAACCA AACTAACCTA
TCCTCAGAGC AATTGGATTC TTGTACAAAT GTCAGCCAAG AGGCATTTCC TAGTGACTTT
GACGTTGTAG ACCCGATAGA TTGGGTTACA CCAGAGCGAG ATGGCATGAA GTTACTGGAG
TTATATGCAA GCTCAATTGT ACTCAAAGAC GGGTTTATTT ATACATTACT TAGTTACGAT
GATGACTGCC TGGAAGAAGT TGACATCTAA
 
Protein sequence
MEEQKGAMEA ESLLEDLGFD QLPIKVIQFI NAVSDESFPI RMEFHAFVSD QFLGKAIGSQ 
DGAGIIINSN IPDSRRLNFT AAHEAGHVCM HIMQGSSQDF ACGNSELGDY FKDPLERQAN
GFASGLLMPK RLVKSLTDGD VNWHNIKQIS DLCDTSLEAV FRRLSWLEKA PVAMVIHQNK
QFKRFVPTKH FNFYINQTNL SSEQLDSCTN VSQEAFPSDF DVVDPIDWVT PERDGMKLLE
LYASSIVLKD GFIYTLLSYD DDCLEEVDI