Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_4349 |
Symbol | |
ID | 4476044 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008573 |
Strand | + |
Start bp | 233152 |
End bp | 233817 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 639720704 |
Product | umuC protein |
Protein accession | YP_863862 |
Protein GI | 117676286 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.844535 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATATTA AAACGGCCTA CGACCTAGCA CAAATGCCTG CAGGGCATGC TCGTAAGCAA TTTAGCATTG AAATCGAGCG TACGGTTCGT GAGCTAAATG GCATCGAGTG CAAACAATGG GATCAGGCAA GAGCCGATAA ACAGCAGATA TTTTCAACTC GTTCAGTTGG TGAGCGGATA ACCGATTTTA ACTCTTTACT GCAGGCATTG AGTAAGCATG TTGGAATTGC AGCAGCGAAG GCAAGGGCAC AGGGATCTAG TTGCAAATCA ATGCTACTGT TCGCCAGTAA TTCGCCTTTT GATGATCAAC CTAAAAGCTT TAAAACGCTG ATCCATTTCC CATGTGCGAC AAATAGCACG GTCGAAATGA CGCAGGCTGT CTCAGCGGCT GCACCCAAAT TATTCAGAGA AGGTGTACGT TACTACAAAA TCGGAGTTGG GCTCATCAAC CTCGTTTGTG ACAAGCGTCA GCAATTCGAC TTATTTAATG CGCCAAAAGC TAATCCTGCT TTGATGCAAG CGCTTGATGG CATTAACTTT AGGTATGGCC GTGATACGCT GTTCTTAGCT GCACAGGGAA TCGAACAAAA GTGGGCTATG CGGCGAGAAC TGCTTAGCCC TCAGTACACA ACCAAGTGGG ACTGTTTGCC TATGATAAAA TGCTAA
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Protein sequence | MNIKTAYDLA QMPAGHARKQ FSIEIERTVR ELNGIECKQW DQARADKQQI FSTRSVGERI TDFNSLLQAL SKHVGIAAAK ARAQGSSCKS MLLFASNSPF DDQPKSFKTL IHFPCATNST VEMTQAVSAA APKLFREGVR YYKIGVGLIN LVCDKRQQFD LFNAPKANPA LMQALDGINF RYGRDTLFLA AQGIEQKWAM RRELLSPQYT TKWDCLPMIK C
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