| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_4339 |
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| Symbol | |
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| ID | 4476069 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008573 |
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| Strand | + |
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| Start bp | 226703 |
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| End bp | 227731 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639720694 |
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| Product | integrase catalytic subunit |
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| Protein accession | YP_863852 |
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| Protein GI | 117676276 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2826] Transposase and inactivated derivatives, IS30 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTATC ACGAACTCAG TATCCCCGAA CGTGCGACCC TTCAACTCGG CCTTGCCCAA
GGTTTCAGCC AGCGGCGAAT TGCCCGGATG CTCGGCCGCT CCCCCTCGAC CATCAGCCGG
GAGCTGCGCC GCAACCGGGC CCCTGGCACC CGCTACCAGG CCTGTGCTGC CCAGCAGCAG
ATGCAGGTCC GCCGCCAGGT CTGCAGGCCT CAGTGCAAGC TGCTGCCGGG CAGTGAGCGC
TTCGAGCTGG TCGTCCATAT GCTGCGTGAG GGTTTGTCTC CCGAGCAGAT TGCCGGCAAG
CTGCGCAGCA TGAACATACC CAGCCTCAGA GAGGCCTACG TCTGCCGCGA GACGATCTAT
AACGCGATCT ACGCCCTGCC GGTCGGTGGC CTGCGCAAGG AGCTGATCAT CTGCCTGCGC
CAGGGCAAGA CGAGTCGCAG GCCGCGCTCT GGCGGCGTCG ATCGGCGCGG CCAGATCCCT
GAAATGCTCA GCATCCACGT GCGCCCGCCG GAGGTCGAAG ACCGGCTGAT GCCAGGCCAT
TGGGAGGGCG ACCTGATCAA GGGCAAGGCC AATGCCTCGG CGGTGGGCAC CTTGGTGGAG
CGTACCAGCG GCTACCTGAT GCTGATCAAG ATGGCCGACG CGACGGCGAC CTCGGCGCTG
GAGGGCTTCA GTGCGGCGCT CAATGGCATG CCGCTGGCGG TGCGCAAGAG CATGACCTAC
GACCAGGGCC GGGAGATGGC GCGGCACGCC GAGATCACCC AGCGGACCGG GGTGGCGATC
TACTTCTGCG ACCCGCACAG CCCCTGGCAA CGCGGCAGCA ATGAGAACAT CAATGGACTG
ATCCGCCAGT ACCTGCCCAA GGGCACGGAC TTGTCGGTGC ATAGTCAGGA AGCCCTGGAC
GCCATCGCTT TGCAACTGAA TATGCGACCG CGCAAACGCT TCGACTTCAA ATGCCCGATC
GAGGTGATGG GCGAAGTGAT GCAAGAAGCC GTGGTGATGC GGCATGATGC TCCCGCTTCA
ATTCAATAA
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| Protein sequence | MSYHELSIPE RATLQLGLAQ GFSQRRIARM LGRSPSTISR ELRRNRAPGT RYQACAAQQQ
MQVRRQVCRP QCKLLPGSER FELVVHMLRE GLSPEQIAGK LRSMNIPSLR EAYVCRETIY
NAIYALPVGG LRKELIICLR QGKTSRRPRS GGVDRRGQIP EMLSIHVRPP EVEDRLMPGH
WEGDLIKGKA NASAVGTLVE RTSGYLMLIK MADATATSAL EGFSAALNGM PLAVRKSMTY
DQGREMARHA EITQRTGVAI YFCDPHSPWQ RGSNENINGL IRQYLPKGTD LSVHSQEALD
AIALQLNMRP RKRFDFKCPI EVMGEVMQEA VVMRHDAPAS IQ
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