Gene Shewana3_4333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_4333 
Symbol 
ID4476063 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008573 
Strand
Start bp222837 
End bp223277 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content50% 
IMG OID639720688 
Productmethionine-R-sulfoxide reductase 
Protein accessionYP_863846 
Protein GI117676270 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0229] Conserved domain frequently associated with peptide methionine sulfoxide reductase 
TIGRFAM ID[TIGR00357] methionine-R-sulfoxide reductase 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAATT GGAAAAGCAT TTACAACTAC CTGGATAACG GCACTCCCGC GCCTCCCAAA 
AAAGTAGAAA AGAGCGAGGA AGAGTGGAAA GAAATTCTGA CGCCAGCGCA ATTTCGGGTC
ATGCGGATGA AAGGCACCGA ACGCGCGCAC ACCGGAGAAC TCTGTTCATT TTATGAAGCT
GGAAGGTACG CCTGTGTGGG CTGCGACACC GAACTCTTTG ACTCGAACCT AAAGTTCGAT
TCGGGAACGG GATGGCCGAG TTTTTCTGAG CCAGTCGCAG ACAACGTAAT TCAATATGAA
CTGGATACGA CCTTCGGGCG CAGAATCGAA GTGCTATGCA ATGTGTGCGA AGCCCATCTG
GGGCACGCTT TTCCAGACGG TCCTGAGCCA TCAGGGGTCC GATTCTGTAT TAACTCGGAG
TCATTGAAGT TTGTAGAATA A
 
Protein sequence
MFNWKSIYNY LDNGTPAPPK KVEKSEEEWK EILTPAQFRV MRMKGTERAH TGELCSFYEA 
GRYACVGCDT ELFDSNLKFD SGTGWPSFSE PVADNVIQYE LDTTFGRRIE VLCNVCEAHL
GHAFPDGPEP SGVRFCINSE SLKFVE