Gene Shewana3_4309 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_4309 
Symbol 
ID4476083 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008573 
Strand
Start bp199403 
End bp199837 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content54% 
IMG OID639720666 
ProductMerR family transcriptional regulator 
Protein accessionYP_863824 
Protein GI117676248 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAAAAG CCGCCGTGTC AAAAGATGTG TCACGATACT TTGAGGTGAT CCCCGACTTT 
GCGGCATTCA TGGATGCCGA TGGGCAGGCA CTCGAATTTC CCCTGACGAT CTCGCAACTG
GCGAAAGCCG CGCAAACCAC AGTGCATACC GTCAGGAATT ACGTCTTGGA AAATTTGGTA
CTTTGCCCAG AGCATTCCGC GGGTGGTTTC GGTTTATACA ATCAATGCGC TTTAAACCGG
CTGCGCTTCA TTCGCGCAGC GCGTGCGGCG GGCCTGCTGA TCCTGGATAT AAAACCCTTG
CTCTACGCCA TCAACGAAGG CGACCAGCAA GCCTGTGAAG CCGCCATGCG CGAACTGCAA
ACCAAAATTG ATGAACGCCA GGCTTACTTG CAGGCATTGG ATTCACAGCT GTCGGAGCTG
CGCCAACTGG CCTGA
 
Protein sequence
MSKAAVSKDV SRYFEVIPDF AAFMDADGQA LEFPLTISQL AKAAQTTVHT VRNYVLENLV 
LCPEHSAGGF GLYNQCALNR LRFIRAARAA GLLILDIKPL LYAINEGDQQ ACEAAMRELQ
TKIDERQAYL QALDSQLSEL RQLA