Gene Shewana3_4298 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_4298 
Symbol 
ID4476072 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008573 
Strand
Start bp181836 
End bp182189 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content45% 
IMG OID639720655 
Productperiplasmic copper-binding protein 
Protein accessionYP_863813 
Protein GI117676237 
COG category[S] Function unknown 
COG ID[COG5569] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.143185 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTAATT CACTTAAAGC TGTTTTATTT GGTGCCTTCT CTGTCATGTT TTCTGCCGGT 
CTTCATGCTG AAACACATCA GCATGGCGAT ATGAATGCTG CCAGTGATGC TTCGGTACAG
CAGGTTATCA AGGGCACCGG TGTCGTTAAA GACATTGATA TGAATAGTAA AAAGATCACC
ATTTCGCACG AAGCAATCCC TGCGGTGGGC TGGCCTGCAA TGACCATGCG CTTCACTTTT
GTTAATGCAG ACGACGCTAT CAATGCCCTG AAAATCGGCA ACCATGTCGA TTTCTCGTTT
ATTCAGCAGG GCAATATCTC CTTACTCAAA AGCATTAACG TTACGCAATC CTGA
 
Protein sequence
MRNSLKAVLF GAFSVMFSAG LHAETHQHGD MNAASDASVQ QVIKGTGVVK DIDMNSKKIT 
ISHEAIPAVG WPAMTMRFTF VNADDAINAL KIGNHVDFSF IQQGNISLLK SINVTQS