Gene Shewana3_4289 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_4289 
Symbol 
ID4475943 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008573 
Strand
Start bp172928 
End bp173350 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content45% 
IMG OID639720646 
Productcopper resistance protein CopC 
Protein accessionYP_863804 
Protein GI117676228 
COG category[R] General function prediction only 
COG ID[COG2372] Uncharacterized protein, homolog of Cu resistance protein CopC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.379862 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTAT TTAACAACGT TTTAGTCGTA ACAAGTCTAT TCCTGAGTGC TTCAGCATTT 
GCTCATGTCG GACTGAGCAG TTCTATGCCC CCTAACGGTG CCATGCTAAG TCAAGCCCCA
ACAACGCTTG AACTGACCTT TACGGCTCCG GTACGTTTGG TCAAATTAAC AATGCAAGAT
GAGAAGCAGC AAAGCGTACC GTTAACATTA CCTTCAAGTG CGGCCAGTCA AGCTGAATTT
TCATTCGCCC TACCAGCATT AAACGCAGCT AATTACACAG TTAACTGGAT GATCATGGGT
GATGACGGTC ATAAGATGAA AGGCAACATG AGCTTTATGC TTCACGACTC TGGCATGAAC
ACTCGCAGTG CACCGCCTAT GACAATGGAG CATGAGACTA GCGAGCACAC TGCACATCAA
TAA
 
Protein sequence
MKLFNNVLVV TSLFLSASAF AHVGLSSSMP PNGAMLSQAP TTLELTFTAP VRLVKLTMQD 
EKQQSVPLTL PSSAASQAEF SFALPALNAA NYTVNWMIMG DDGHKMKGNM SFMLHDSGMN
TRSAPPMTME HETSEHTAHQ