Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_4288 |
Symbol | |
ID | 4475942 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008573 |
Strand | + |
Start bp | 172099 |
End bp | 172812 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 639720645 |
Product | copper resistance B precursor |
Protein accession | YP_863803 |
Protein GI | 117676227 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3667] Uncharacterized protein involved in copper resistance |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.28688 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATAAAA CGAATTTAGT GGCATTGGGA CTGTTGAGTC TGAGCGCCTC ATTGGCTAGC TCAGCTGTGT TTGCCGGCGG TAATGATGAT CCTCTATTAA CAAAAGTCAT GCTGGATCAA TTTGAAAAAG GCGTGGATCC GCAAGATCCT ACCCAGTTTA GTGCACAAGC CTGGTTAGGT TACGATTTGA ATAAGTTGTG GCTTAAAACC GAAGGTGAAT ATTCAAATAG TGATAAGCAA GACCTTGAAA TTCAGGCTCT TTACAGTAAG CCCATCGCAC CATACTGGGA TGTACAATTC GGTATTAAAA CCGATATCAA ACCGACGCCG AACCGTAATT GGGCTGTGAT TGGGGTTCAA GGGTTAGCGC CATATTTTTT TGATATTGAC GCGGCCTTAT TCATCGGTGA ACAAGGCCGT ACGGCTATGC GGTTGAGTGC GGAATATGAA CTGTTAATCA CTCAAAAATT GATACTCACA CCTGAAGTAG AAGTTAATTT ATTTGGTAAG GACGATGCTG AACTTGGAAT AGGCTCAGGC TTATCTGACG TCAGTGCAGG GCTGCGATTG AGATACGAGA TTGTTCGAGA GTTCGCACCC TATATCGGTG TTGATTGGCG TCAGAAGCTC GGTAATACCG CCGATTACGC CCGAAGTGAA GGGGAAGATA CACAAGAAAC CCAGTTTGTT ATTGGTTTTA GCGCGTGGTT CTAA
|
Protein sequence | MNKTNLVALG LLSLSASLAS SAVFAGGNDD PLLTKVMLDQ FEKGVDPQDP TQFSAQAWLG YDLNKLWLKT EGEYSNSDKQ DLEIQALYSK PIAPYWDVQF GIKTDIKPTP NRNWAVIGVQ GLAPYFFDID AALFIGEQGR TAMRLSAEYE LLITQKLILT PEVEVNLFGK DDAELGIGSG LSDVSAGLRL RYEIVREFAP YIGVDWRQKL GNTADYARSE GEDTQETQFV IGFSAWF
|
| |