| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_4284 |
|---|
| Symbol | |
|---|
| ID | 4475938 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008573 |
|---|
| Strand | - |
|---|
| Start bp | 167962 |
|---|
| End bp | 168783 |
|---|
| Gene Length | 822 bp |
|---|
| Protein Length | 273 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 639720641 |
|---|
| Product | integrase catalytic subunit |
|---|
| Protein accession | YP_863799 |
|---|
| Protein GI | 117676223 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2826] Transposase and inactivated derivatives, IS30 family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCAGCAA GGGCAGTCAT TATTGCCCAA ACGAAGCTCA GTCAGGTGTT ATCACTCAAA
AAACGCACAT TAGCGCGTAA ATACAGAATA CCTCAGGAGC GTGTTGATTT TATCCGCCTC
CTTTTAGAAG CGGATTGGAG TCCAGAGCAG ATTTCCAGTG TATTAACTAA AGTCGGTGCC
GCTGTCAGCT ATGAGTGGAT CTACCGATTT GTTGCGCAGG ATAAACGCTC GGGTGGCAAG
TTATATCGCC ACTTGAGGCA AGGTCACAAG CGGTATCGTC GCGGTAAAAA AGAGAAAGCA
CCAGCGATCA AAAATGCGGT TTCTATCGAT GATAGGCCAA GCATAGTTGA CAGTAAGGAG
CGATTTGGTG ATTGGGAAAT CGACACCGTA TTAGGCAAGC ACGGCACGGG GGCGATGGTG
ACTATTTTAG AGCGTAAAAC ACGATTTTAC TTGGTGAAGA AAGTGCCATC CAAGTCAGCG
GATGATGTCA CTAGAGCAAC CATAGAACTA CTCATGCCTT ACAAGGAGCA TGTCCATACC
ATCACGGCAG ATAACGGGAG AGAGTTTGCA GGCCATGAAA CCATCGCAAA GGAGTTGGAG
GCTGATGTTT ACTTTGCCCA CCCTTATAGT TCTTGGGAGC GTGGAGCCAA TGAGAATGCT
AACGGTCTTT TAAGGCAATA TGTGAAGAAA GGAACCGACC TAACAACGGT AACAGACAGT
GATATTGAAT TCGCTTTATC GCGGATAAAT TATCGACCGA AAAAGTGTTT AGATTTCAAG
CAACCAGCGA TTGTCTTTAA AGAAATGGTA TTGGCTGCTT GA
|
|---|
| Protein sequence | MAARAVIIAQ TKLSQVLSLK KRTLARKYRI PQERVDFIRL LLEADWSPEQ ISSVLTKVGA
AVSYEWIYRF VAQDKRSGGK LYRHLRQGHK RYRRGKKEKA PAIKNAVSID DRPSIVDSKE
RFGDWEIDTV LGKHGTGAMV TILERKTRFY LVKKVPSKSA DDVTRATIEL LMPYKEHVHT
ITADNGREFA GHETIAKELE ADVYFAHPYS SWERGANENA NGLLRQYVKK GTDLTTVTDS
DIEFALSRIN YRPKKCLDFK QPAIVFKEMV LAA
|
|---|
| |