| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_4280 |
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| Symbol | |
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| ID | 4476004 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008573 |
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| Strand | + |
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| Start bp | 161679 |
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| End bp | 164060 |
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| Gene Length | 2382 bp |
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| Protein Length | 793 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 639720637 |
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| Product | putative periplasmic protein |
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| Protein accession | YP_863795 |
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| Protein GI | 117676219 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00284905 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTTCA GTCAGCATCG CTACAAACTT TTAGCGGCTG CGTTATTAGC CTTGCCACAT
TTTGCATTTG CGGAAATTGA AGGTATGACC TTTACGTCTG TTATGCAAGA ACAGACGACT
TTGACACCTG CTTCGGCTAT GGCCATCAAC CCGGTTCTTG AACATTCAAT GAATGTTTAT
GTGTCTGCCG GTCTTGACCG AAAGCTAAAA CTATATTGGC TTTCTAGTGG GGTCAAGCTT
AACGAAGTCA ATACGGGTGT GATTGGTGTT TCCGACAGAA TTACATTTCA AGGAAAAGAC
TTTTACGGAA AACAGATCTC TATAGTTGCG CCTAATTCAC AGGGAAATTA TACCTTACAG
GCTGACTTGT TAACCGTTGA TGGGAATGTG ATTGGCTCTT GGTCTATTCC GGTGACAATA
GATACTCAAG CACCAACAGC CAATAGTTCT GATTTAGCTT TTAACTATAG ATCCTTCGGT
GGAACTTTAG CTTCATATAG CCCTATGGAT TTCGGCCAAT TAAAACTCAC AGGTATTCAA
GATACAGGTG CTGGGCTCAA AAATGTTCTC TACATTGTGA AAGATGATGT GAGCCTTTCA
TTAATAAATT CGATTAATGC TCAATTGGAT TTAGATACTT CCACTGCGAG CCTTTCGTCC
CTACCATCTG AGGTTTTACC CAGTGATAGA GGTTGGTATC AGGCTGGTTT TAGGGTCTTT
GATGCAGCAG GTAATTATTC AGATTTTACT GCTCGCTCGT TTATCGAAAA AGCCTCATAT
CCCTTACCAG TTCGTAGCGA CATTTATGAT GCTTCAAGTG CTACGTGGAA GCCGTACACA
TCTTGGATGA CCATCTACAA CAATCCGATA AAAGTCCGCT ATAGACGGCC CTATTCTGAA
ACGTTGGAAG CAAACGGGGA TTATGGTTGG AGTAGTTATG GTTATCGAGA GGGTGATTTT
GTCTATAACG AATTTACTGT CTCATATCCT ACAGTAAACC CATATTGGGT TGCGCTGACG
AAAAGTGGCA TTCACTCAGT CAATTACCTT TCTGATTTCA AGTTCACCCT AGGCCCAGGT
GTTGATCGTT CGCCTACTAA GCAACCTGAC ACTGTACAAT GGTTTAGTGA GGAAGGTGGC
AGTGGGGGCG AAAGAATCAG TGTTGGCAAA TACACAAAAG TGGTAAGGCT TCGTCTAAAC
AGTGAAAAAA TGGGTTATGA ACAATTAGCC GTTGTTTCAG GTTTAGGCTC CTGTGTTATC
CCAATTGGTG AAACCTATTG CGATGTTACA ATCAACAGAG TATTTGAGTC TGGTTTTGGC
TATACACCCT ACAGCTATGT GGTCTACTCA AGTGTGAACG GTGTCAGTGA TGGACGTTTT
AGTGCTCAAT TTAATTATTG GTATACATAT TGGGATTTTA TTGCTCCCAC AATCGAATCG
GTCAATGTTA CTGATGATTC AATAACTGTA AACGTGTACG ACACGAACAC TACTAGCGAT
TGGCGTTCTG GAATGTGGAA GACAGAGGTT TTCCGATTGC AATCTAGTTT AGGCTTCGCA
ATATCTCCCG ATTCTTGGGT GATCACCGGC ACCGGCCGTC ATCGAGTTAC TTTTAAACTC
AATCGATTAC CAAGTGGTCG TCAAAATATT TCGTTTTACG CAGATGACAC CTATGGTAAT
CGGGTAACAC AGTCGATTCT ATCCAATTAT CTAAACGACA CTACGCCTCC AGTTTTGCGA
TTGCAATCGC CTTCTGGAGC GCAAATCACA AACGGAAGCA CCATTAATGG TTTAGAGAGT
TTACGTATCA GCATTACTGA TGATAGTGAA GCCAATATCA ATTCGGTTGT GCTATCTGGA
GGGGCTGCTA AGGATTCAGT TTATGTTTCT ACAAATAATT TAGGTGATGG TATTTACGAC
CTGAATTACC CTCGTTTATT CCCTAGTTTG GAAGCGAATG AAACTTACAC TATCAATATT
ACCGCTCAAG ATACAGCAGG GAACGCATCG ACGTTAACTT CAACCTTCTT GTATTTGCCT
GCCAACTTAT TGCAAGTTGG GCAAATGACG ACTTTGGCTG TTAATAAACA ACTGCAGAAC
ACGCAAAACG ACCCAATTAC ATCAATTAAA ACTGGTGTGC TCAGAACGGC TGAAGGACAA
CTCGCGTCCG GTGCTCAAAC GGCATTTATC ACGTTACGCA GTGACGCCAA AATCAACGTC
AATATCCTTG GTAGCGTGTT GCAACCTGGG GAAACTAAAC AAATCACGAT CATCCCCAGC
ATCACAGGTG AAGTTGTTAT TCCTGTTTAC TCTGCTTCTC CTGGTGTGAA AGGGCAGGCA
AGCTTCATGA TCGACATTCC GCAAATCACT TCTACCAATT AA
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| Protein sequence | MNFSQHRYKL LAAALLALPH FAFAEIEGMT FTSVMQEQTT LTPASAMAIN PVLEHSMNVY
VSAGLDRKLK LYWLSSGVKL NEVNTGVIGV SDRITFQGKD FYGKQISIVA PNSQGNYTLQ
ADLLTVDGNV IGSWSIPVTI DTQAPTANSS DLAFNYRSFG GTLASYSPMD FGQLKLTGIQ
DTGAGLKNVL YIVKDDVSLS LINSINAQLD LDTSTASLSS LPSEVLPSDR GWYQAGFRVF
DAAGNYSDFT ARSFIEKASY PLPVRSDIYD ASSATWKPYT SWMTIYNNPI KVRYRRPYSE
TLEANGDYGW SSYGYREGDF VYNEFTVSYP TVNPYWVALT KSGIHSVNYL SDFKFTLGPG
VDRSPTKQPD TVQWFSEEGG SGGERISVGK YTKVVRLRLN SEKMGYEQLA VVSGLGSCVI
PIGETYCDVT INRVFESGFG YTPYSYVVYS SVNGVSDGRF SAQFNYWYTY WDFIAPTIES
VNVTDDSITV NVYDTNTTSD WRSGMWKTEV FRLQSSLGFA ISPDSWVITG TGRHRVTFKL
NRLPSGRQNI SFYADDTYGN RVTQSILSNY LNDTTPPVLR LQSPSGAQIT NGSTINGLES
LRISITDDSE ANINSVVLSG GAAKDSVYVS TNNLGDGIYD LNYPRLFPSL EANETYTINI
TAQDTAGNAS TLTSTFLYLP ANLLQVGQMT TLAVNKQLQN TQNDPITSIK TGVLRTAEGQ
LASGAQTAFI TLRSDAKINV NILGSVLQPG ETKQITIIPS ITGEVVIPVY SASPGVKGQA
SFMIDIPQIT STN
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