Gene Shewana3_4278 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_4278 
Symbol 
ID4476002 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008573 
Strand+ 
Start bp159748 
End bp160467 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content46% 
IMG OID639720635 
Producthypothetical protein 
Protein accessionYP_863793 
Protein GI117676217 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.501581 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAACA GCTATTACAG CCAACCCGCT TACAACGCAA CCCCACAAGC CCAATCTCAA 
TCTGCTCCAA TGCAACAGCA GACGCATTAT TTTCAACCGC GCCAAGGTAA CCCTATGAAT 
ATTGGGCCTC ACCACGAGGC CGCAAATTAT GATGAATATC AGCAGTACCA ACCCCAGCAT 
GACAATCGCC GCGGATTTGA AGAGCAATCC GCACAAAGCG CTCAAAATGT TCAGCCTGCA 
GCTGCTCCAG AATTTGAAAA ATCGGTAAAA ATCCACGGTA AGGCCGCTGC GCTGACCATC 
GTCGCATCTG TCACTAAGAA AGGTTTTCAC ACCTTGAACA TTGAAGGCGC AAACGGAATG 
GGGGATGGCA CTAAAAAGTT TGATTGGCAG GATAAGACAA TAATTCAAAT CACCGCGACT 
GAATATCGGC ATTTGTTAGC CGTGCTATTC GGATTCATTC CATTCATTGA GTTTAAGTCA 
CATGGCCCAC AGAAAAACAA AAGCATCTCG GTCAAGCGAC AACAGAATGG GTTTTTCTTC 
TCAATCAATG AGGGTGGCAA GAAGCCAAAA GCTGTTCCTG TGAGCTTTGA TGATGCTTAC 
TTACTCGGGG TCTACGCATT GGATGTATTT GCACGAAATT ACCCTAACAT TGACTCACAT 
TGCCTGTTAA ATACCGTTCA AACCTTTACA CAGCTGCCGT ACTATCCTGT CCAGCAGTAG
 
Protein sequence
MNNSYYSQPA YNATPQAQSQ SAPMQQQTHY FQPRQGNPMN IGPHHEAANY DEYQQYQPQH 
DNRRGFEEQS AQSAQNVQPA AAPEFEKSVK IHGKAAALTI VASVTKKGFH TLNIEGANGM 
GDGTKKFDWQ DKTIIQITAT EYRHLLAVLF GFIPFIEFKS HGPQKNKSIS VKRQQNGFFF 
SINEGGKKPK AVPVSFDDAY LLGVYALDVF ARNYPNIDSH CLLNTVQTFT QLPYYPVQQ