Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_4246 |
Symbol | |
ID | 4475839 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008573 |
Strand | - |
Start bp | 121277 |
End bp | 121765 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 639720603 |
Product | XRE family transcriptional regulator |
Protein accession | YP_863761 |
Protein GI | 117676185 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02612] mobile mystery protein A |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.000130634 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAAAAAAT CCGGTGTCTA TGCCGTTGCA CTCAAGCAAG TCAAAGCAAA AATCAGCGCT TTACTCGGTT TATCTGTGCC TAAACCGCCG AAAAATGGTT GGGTGCGCAG TATCCGTGAG GCCTTGGGGA TGTCGGGCGC GCAATTAGGT GAACGTCTTA ATCTCTCTCG TAATCAGGTC TCCATATTGG AGCGTAAAGA AGCTGATGAA ACCATCACAC TCAAACAACT TAAACAACTG GCGACCGGGC TCGATGCCGA ACTGGTTTAT GCGATTGTTC CGCGTCAGTC GATTGATGAC ATGATAGAAG CGCGCGCTAT GGAGTTGGCC AAGCAGCGTT TGGCCATGAG CCACCAATCG ATGTTTTTAG AAGCACAGCA GTTAACCTCA GAGCAACAAC AGCAAGCGCT GGTTCAATTA GCCAATGAAA TTAAAACGGG CAGCACCCGA GATTTGTGGA AAGTCAGTTT GCAGGAGAAA TACCAATGA
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Protein sequence | MKKSGVYAVA LKQVKAKISA LLGLSVPKPP KNGWVRSIRE ALGMSGAQLG ERLNLSRNQV SILERKEADE TITLKQLKQL ATGLDAELVY AIVPRQSIDD MIEARAMELA KQRLAMSHQS MFLEAQQLTS EQQQQALVQL ANEIKTGSTR DLWKVSLQEK YQ
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