Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_4238 |
Symbol | |
ID | 4475962 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008573 |
Strand | - |
Start bp | 110255 |
End bp | 112495 |
Gene Length | 2241 bp |
Protein Length | 746 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 639720596 |
Product | hypothetical protein |
Protein accession | YP_863754 |
Protein GI | 117676178 |
COG category | [S] Function unknown |
COG ID | [COG4694] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.648959 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00399627 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGATACGCT CATTAAAATT AGCAAACGTT GCAACATACA ATGCTTCAGG TGTTCATTTG TCTGACCTAA AAAAGATCAA TTTCATCTAT GGCGCTAATG GTTGCGGCAA AACCACTGCA TCAACTTACT TAAGTCAACC CAATGATGAC AAGTATCAGC ACTGCCAAAT CATATGGGAA AACGAGCGAC CATTAGGCAC TCTAGTTTAT AACAAAGCAT TCAGAGAAAA GAATTTTGGC TCTAGTGATA TCGCTGGTGT TTTCACGCTT GGCCAAGCGA CAAAAGAACA GATTGATTCC ATCAAAGAAA AAAAAGCATC ATTGCAAAAT GAACAAGATC AGATTGCACG CCTTATTGTT AGTTTAAATC AGCAGACGGA TGCCACTAAT GATGCAGAGA ATGATATAAC TGAACGTTGC TGGAAAGTCT TTAAATCTTA TGAATCCGAA TTTCGCTCTG CGTTAACAGG CTCCATTGGT AGTAAGGCAA GATTCCGAGA CAAAATGCTT TCAGAGCTAA CTAACACGGG TTCTACAGCA CTCTTATCAC TAGAAGAATT ACAAACAAAA GGCAAAACCT TACTGGGAGA GAGACCACCT GTTTACCCTT TACTCAGCTC TTCAACTAGC ACAACCCTTC CAACGATAGA AGAAGATAGT ATTTGGTCAA AAGTAATTAT TGGTAAATCC GATGTTGCAA TTTCAGAGCT AATCTCGCAC CTCAGTAATA ATGACTGGGT AAACCAAGGT AGAAATTACA TAGGATCAGA CTCTCGTTGC CCATTCTGCC AACAGAATAC GATTGATGAT GAGTTTAAAA AAGAACTTGA AAGATATTTT GATGACACGT TCTTAAGAGA CATTGAACAG GTCAAAACAT TGGAACGTTC ATACCGGAGT ATGACAGATA GTCTTCTTGA AGAATTTCAA AACACTCTGG ATACGGAGAA GAAAAATACC GATACGAAGC TCGATACTGA CCTATATCAA ACTCATTTAA CCTCCCTAAA GAACATCATA AAGTCTAATC ACTTAGAGTT CGTTTCAAAA TCTGAAAAAG CGAGCTTACA AGTAAATGTT ACAAGCTCCA GAGCGGAAAT AGCTAAACTT AACAGCTTAA TTAAAGAAGC AAACGACACC CTGAATAAAC ATAACAAACT AGCCCGAGAC TTCGACTCTT CTCTAGCTGT TTTTATTCAA GAGATTTGGC GATTCTTAAC GAATCAAATA GAAGACGACT TAAAGAAGTA CAACAAAGGA ACTAAAGGAC GAAATAAAGC TGTCACAAAG ATATCTGAAA ACCTTACCCA AAGAAGAACT AAGGAATCTG GGCTAACACG GGATATTAAA GATCTGAGTC GAAATATGAC AAGTGTCCAA CCTACAGTCG ATGAAATAAA TAGGTTGTTG GTTGGATTTG GCTTCCTTAA CTTCAAAATA TCCCCATCAA CAACTCTTCC GAACCATTAC AGTATTGAAC GCCTAGATGG AGAACAAGCT CAAGATACTT TGAGTGAAGG AGAAGTAACC TTCATTACTT TCCTCTACTT CTATCAACTA ACCCGTGGTT CGTTTTCCGA AGAAGAAATA GCTGAAGATC GGGTTGTAGT TATCGATGAT CCAATATCAA GTCTTGATAG CAACGTACTT TATATTGTTA GTGCTCTGGT TAAAGACCTC ATTCGAGAAA TCAAAACAGA TCAAGAGTCC AGTATAAAGC AACTTATCTT ATTGACTCAC AATGTGTATT TCCATAAAGA GGCTTCATTT CAAAATGGTC GTTCAAATGG CTGTAAGGAC ACAAATTTTT GGATCTTAAG AAAAGCTAAC AATGTCACTA GTGTAAGCGC ATACGAACAA AAGAATCCTA TTGAATCATC ATACGAATTA CTCTGGCGTG AGTTAAAAGA ACGAAATGCA AACTCCGGTA TTACCATCCA AAACACGATG CGTAGAATAA TTGAGAACTA CTTCAAGATT CTCGGACGCT TTAGTGATGA CGATATATTA TCAAAATTTG AAAATTTGCA GGAGCAACAA ATTTGCAACT CACTAATGTA TTGGATTAAT GATGGTTCCC ACTGTCTCCC AGACGACCTT TATATTCAGC ATCCAGATGA CTCAACAGAG TTATATATAT CTGTGTTCAA AAAAGTCTTT GATTATGCTG GCCATCTCTC ACACTACAAT ATGATGATGG GAGAAGAAGC AGACTCAACA CCTATAGAGT TACCGATGTA G
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Protein sequence | MIRSLKLANV ATYNASGVHL SDLKKINFIY GANGCGKTTA STYLSQPNDD KYQHCQIIWE NERPLGTLVY NKAFREKNFG SSDIAGVFTL GQATKEQIDS IKEKKASLQN EQDQIARLIV SLNQQTDATN DAENDITERC WKVFKSYESE FRSALTGSIG SKARFRDKML SELTNTGSTA LLSLEELQTK GKTLLGERPP VYPLLSSSTS TTLPTIEEDS IWSKVIIGKS DVAISELISH LSNNDWVNQG RNYIGSDSRC PFCQQNTIDD EFKKELERYF DDTFLRDIEQ VKTLERSYRS MTDSLLEEFQ NTLDTEKKNT DTKLDTDLYQ THLTSLKNII KSNHLEFVSK SEKASLQVNV TSSRAEIAKL NSLIKEANDT LNKHNKLARD FDSSLAVFIQ EIWRFLTNQI EDDLKKYNKG TKGRNKAVTK ISENLTQRRT KESGLTRDIK DLSRNMTSVQ PTVDEINRLL VGFGFLNFKI SPSTTLPNHY SIERLDGEQA QDTLSEGEVT FITFLYFYQL TRGSFSEEEI AEDRVVVIDD PISSLDSNVL YIVSALVKDL IREIKTDQES SIKQLILLTH NVYFHKEASF QNGRSNGCKD TNFWILRKAN NVTSVSAYEQ KNPIESSYEL LWRELKERNA NSGITIQNTM RRIIENYFKI LGRFSDDDIL SKFENLQEQQ ICNSLMYWIN DGSHCLPDDL YIQHPDDSTE LYISVFKKVF DYAGHLSHYN MMMGEEADST PIELPM
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