Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_4237 |
Symbol | |
ID | 4475961 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008573 |
Strand | - |
Start bp | 109580 |
End bp | 109891 |
Gene Length | 312 bp |
Protein Length | 103 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 639720595 |
Product | XRE family transcriptional regulator |
Protein accession | YP_863753 |
Protein GI | 117676177 |
COG category | [K] Transcription |
COG ID | [COG2944] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.00492028 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACTGATG TACGCTTAGA TAGAATGCAC AAACTGGCTC AGCGTTTAGC TAAAAATGGC ACGATGGATC AGCTAACCAT GCGAAAAATC GATGCGCTCG CACTCAGCGC AAAGCTAGAT GAAATGACAG CAGAGCGAAT AAAGAATCTA AGAGAGCGTG AGCACATTAG CCAAGGTGTC CTAGCTACGA TTCTGAATAT GAGCAACGAG AGCGTTCAAA AGTGGGAACA GGGAAAGTCT AAGCCACAGG GTGCCGCGCT AAGATTGCTT AATATGATTG ATAAGAAAGG CATTGAGTGC GTGCTTTCTT AA
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Protein sequence | MTDVRLDRMH KLAQRLAKNG TMDQLTMRKI DALALSAKLD EMTAERIKNL REREHISQGV LATILNMSNE SVQKWEQGKS KPQGAALRLL NMIDKKGIEC VLS
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