Gene Shewana3_4237 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_4237 
Symbol 
ID4475961 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008573 
Strand
Start bp109580 
End bp109891 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content45% 
IMG OID639720595 
ProductXRE family transcriptional regulator 
Protein accessionYP_863753 
Protein GI117676177 
COG category[K] Transcription 
COG ID[COG2944] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00492028 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACTGATG TACGCTTAGA TAGAATGCAC AAACTGGCTC AGCGTTTAGC TAAAAATGGC 
ACGATGGATC AGCTAACCAT GCGAAAAATC GATGCGCTCG CACTCAGCGC AAAGCTAGAT
GAAATGACAG CAGAGCGAAT AAAGAATCTA AGAGAGCGTG AGCACATTAG CCAAGGTGTC
CTAGCTACGA TTCTGAATAT GAGCAACGAG AGCGTTCAAA AGTGGGAACA GGGAAAGTCT
AAGCCACAGG GTGCCGCGCT AAGATTGCTT AATATGATTG ATAAGAAAGG CATTGAGTGC
GTGCTTTCTT AA
 
Protein sequence
MTDVRLDRMH KLAQRLAKNG TMDQLTMRKI DALALSAKLD EMTAERIKNL REREHISQGV 
LATILNMSNE SVQKWEQGKS KPQGAALRLL NMIDKKGIEC VLS