Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_4229 |
Symbol | |
ID | 4475953 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008573 |
Strand | + |
Start bp | 103338 |
End bp | 103865 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 639720587 |
Product | single-strand binding protein |
Protein accession | YP_863745 |
Protein GI | 117676169 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0629] Single-stranded DNA-binding protein |
TIGRFAM ID | [TIGR00621] single stranded DNA-binding protein (ssb) |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.201329 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0453464 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTTCAG TTAATAAAGT TATCATTGTT GGCAATATCG GTCAGGAAAT TGATTTTAAG ACACTTCCTA GCGGTACAAG CGTAGCAAAT TTCAGTGTGG CCACGAGTGA CACTTGGAAA GACCAACAGG GTGTTCAGCA AGAGGTGACC GATTGGCACA AGATTGTTGT TTGGGGCAAG CTGGCTGAGA TTATCAATCA ATACGGTGGA AAAGGCCGTC AGGTCTACAT CGAAGGCAAG CAAAAGACTC GCAAATATAA AGATGCCAAT GGCCAAGAAC GCTACACAAC AGAAGTTGTC GTGGACTTTG ATGGTCAAGT ACAGCTTTTA GGTGGTTCAC CAAAGGATAA TGCAGGCCAA AGCTCTGGTT ATCAGCAAAA CGCACCACAG CAGCAAGGTT ACCAGCAAAA CGCACCGCTG CTGCATGGAT ACCAGCAAAA TGCACCGCAG CAAGGCGGTT ATCAGGCGCA ACCACAGGGC GGTCACCAAC AAAATACTCA GCAACAGGCT TATAACTACC ACCGTTAA
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Protein sequence | MGSVNKVIIV GNIGQEIDFK TLPSGTSVAN FSVATSDTWK DQQGVQQEVT DWHKIVVWGK LAEIINQYGG KGRQVYIEGK QKTRKYKDAN GQERYTTEVV VDFDGQVQLL GGSPKDNAGQ SSGYQQNAPQ QQGYQQNAPL LHGYQQNAPQ QGGYQAQPQG GHQQNTQQQA YNYHR
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