Gene Shewana3_4220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_4220 
Symbol 
ID4475979 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008573 
Strand
Start bp92450 
End bp93277 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content46% 
IMG OID639720578 
Producthypothetical protein 
Protein accessionYP_863736 
Protein GI117676160 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.666716 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.507877 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTATCA ATAAAAAGGT AACCCAAATT GCGTTAGCAG TATCGCTTGG TTTGTGTCAT 
CCGCTGGCTA TGGCCAACAG TGGCTTAGAT GCTTTGTTAG AGGCAAACAA ATCAGCTAAG
CAGGCACAAA CACAGCCAGA GAAAATGCCG GAAGGTGAGG GTAAGGAGCT TATCAAGAAT
GCTTTCTCGA TGTTAAACGA CATCGTATGG TCTCAAGCGC TTCCCGTGAA AGGTATGGTG
ATGATGGTCT CTCGAGATGG TACTCAAGTG CTCGCCTCCA CGGATGGCAG GATTCTCGTT
AAAGGCGGCG AGGTATTCGA TGGCTGGAAC CGTTCACCTA TAGCAACTGA AGCCAACGCA
AAGGCGGCAT GGCTTGCCAA GATTGATAAG GTCTTAGGGG TTTCTGTTAA GGATATGGCT
GCATATTACA TTGGTGATTT AGCAAAAACA GAGCCCGATC TAGTTGTATT TGTGGACCCT
TTATCGAAGT TAAACGCAGA CCTATTCAAT AAGCTCCTTT CGATTAAAGG TAAGCAAATC
GCGTTACTGC TTACCCCATT AGTGAATGGT AAAGAGGCTG CGATTAGAGC GAGGGAGCTG
TGGTGCGCCA AAGACCAAAG TGAATCCCTA CGTTTGCTAG TTAACAGTGA TTTCACCACA
GCCCCGGAAA CCCTCGAAAA CTGCGACATT AAAAAGCTAT CCACCACGAT TGGGGTTACT
CAATTTCTAC AGATCCGTCG TTTACCCTAT TTCGTTAACG GACACGGACT GCACAACGTC
GGATTACCCG ATTCATTAAC TGATTTCATT TCCCAAACGG AGAAATAA
 
Protein sequence
MSINKKVTQI ALAVSLGLCH PLAMANSGLD ALLEANKSAK QAQTQPEKMP EGEGKELIKN 
AFSMLNDIVW SQALPVKGMV MMVSRDGTQV LASTDGRILV KGGEVFDGWN RSPIATEANA
KAAWLAKIDK VLGVSVKDMA AYYIGDLAKT EPDLVVFVDP LSKLNADLFN KLLSIKGKQI
ALLLTPLVNG KEAAIRAREL WCAKDQSESL RLLVNSDFTT APETLENCDI KKLSTTIGVT
QFLQIRRLPY FVNGHGLHNV GLPDSLTDFI SQTEK