Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_4204 |
Symbol | |
ID | 4475875 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008573 |
Strand | - |
Start bp | 68453 |
End bp | 70252 |
Gene Length | 1800 bp |
Protein Length | 599 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 639720562 |
Product | UvrD/REP helicase |
Protein accession | YP_863720 |
Protein GI | 117676144 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0210] Superfamily I DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCTCAA CAAAAGATCA GGGGTTAGTC ATCGAACGTG ACGACAATAC CCTTGTTTGT GCATTACCTG GAAGTGGTAA AACCTATGTT TTGGTAGAGC TGACTAAGCG TTTACTGTCC AGAGATGGCG CCTATTCTGT CCATTTACTT ACGTTCACGG ATGCGGCTCG TGTTGAGCTC ACTGAGCGAA TGCTTCACGC CCTTACCCCA CGAGCTATGG AACGGGTAAC TATCAGTACC TTTCATTCAA CTGCGTTAGC GATGACTCGC GGCAAACTTA ATCGCCGGTT ATTAATGGCC AATGAGTTAA TGCTGTTCGT TAAGTCGGTG CTCAATGAAG CTGACCATTT AGACCTCATT GATAAGTTCA GATTTAAGGT GCCGGACGTT GTTAGGCTGT TTGATGAAAT GGGCCGAAGC CAAGACCTGT CAAAAGAGTA TAGTGGCACA GAAGTTGCCT TGTACGAGCT TTACAAAGAT ATGCTGATTA AGCAGGGCAA GACGGATTTT AACGTCGTAT GCCAATTGTC CGTGAGCTGG CTGGCGCAAA GGGAAATCCC TCCTGTGTCG GCTACGCATA TTCTGGTAGA CGAATTTCAA GATACCGATG CACTGCAATA CATGTGGCTA CGTGAACACG CGCTGCTTGG TAAAAAGCTG GTGGTCGTTG GTGATGACGA TCAAGCTATC TACTCGTTTA GGGGTGGCCA AGGATACGAC AATATGGTGG CCTTTCAGTC AGAGTTTAAC GCAGATGCTT ACGTGTTAAG AGACTGCTTT AGATGCTCAA AGGAAATCCT GAATCGAGCG GGGATGCTGA TTAAGTTCAA TAACCCCGAT AGGATTGATA AGCCGATGAA TGCGGTTAGG GAAGAGCAAG GTACTGTCAA AATCATTAAG TCTGGCACGA TGGATAACCA GCTTAACCAG ATTTTAGATG CGGTGAGCAA AGAGCCTCAT ACGTGGGCAG TAATTGCGAG GAACAATGCC ATCCTTGACC GCGTTGAAAC GGTTATTCAG GGTCATGGCA TTGAGTACAA TCGACGCGGC GGTAAGTCGT TTTTTGATGG CGTAGCACCC TACAGCTTGA TTCAAATTGC CTCTGTGATT TCAGGCAAAC ATGATGACCA TACCCTGCAT CGGGCTTTGG CGGCTTTGTC AGTGCCAGAG GCGGAAACGG CAAGAATTAT TGGTTTATGC CGGACGGCGA AAACGACCTT TGGCGGCCTT AAACATGCGG AGATTGGTCA TCATGCTGAC CTGCAAAAGT TCCACTCATT AGCTGAAGCC TGGCATGACA TACCTGCAGG GCGTGAGGAT GCTAAGCGAA CCTACATGCA ATCTATCGTT AAATTGTTAG CCATACACCT CGATAAGCGC GACCAAAAAC ATGCTCAAGT CGTCGGTGAT GTCATTGCTG GACGTCACTG GGAGAGCCTG GGCGAAAGTA TTGCGCAACT GAAGTCTTCG TTAGACTGCA AAAAGCGTAA AGACCAATCA GAAGAGGCCG CACCTAAGCT GTCATTGATC ACTATGCACT CTTCAAAAGG TTTGCAGTTC GACAACGTGT GGATTGTGGG GAGCGACACA GGAACCATCC CGAGCAAAGA GGCGTTAGCA GAGGGTAAGA TAGCGGAAGA ACGTCGATTA ATGTATGTGG CCATGACCCG CGCTATCTCG TCGCTCACTA TGAGTTACAC CAGTGAGCCC AGTGAGTTTC TGTACGAGGT TAACAAAGAA AGGGTTGTAG AGCTGGAGTC TGGATATGAA GACGATGCTG ACGATTTTGA CGCCGCTTGA
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Protein sequence | MGSTKDQGLV IERDDNTLVC ALPGSGKTYV LVELTKRLLS RDGAYSVHLL TFTDAARVEL TERMLHALTP RAMERVTIST FHSTALAMTR GKLNRRLLMA NELMLFVKSV LNEADHLDLI DKFRFKVPDV VRLFDEMGRS QDLSKEYSGT EVALYELYKD MLIKQGKTDF NVVCQLSVSW LAQREIPPVS ATHILVDEFQ DTDALQYMWL REHALLGKKL VVVGDDDQAI YSFRGGQGYD NMVAFQSEFN ADAYVLRDCF RCSKEILNRA GMLIKFNNPD RIDKPMNAVR EEQGTVKIIK SGTMDNQLNQ ILDAVSKEPH TWAVIARNNA ILDRVETVIQ GHGIEYNRRG GKSFFDGVAP YSLIQIASVI SGKHDDHTLH RALAALSVPE AETARIIGLC RTAKTTFGGL KHAEIGHHAD LQKFHSLAEA WHDIPAGRED AKRTYMQSIV KLLAIHLDKR DQKHAQVVGD VIAGRHWESL GESIAQLKSS LDCKKRKDQS EEAAPKLSLI TMHSSKGLQF DNVWIVGSDT GTIPSKEALA EGKIAEERRL MYVAMTRAIS SLTMSYTSEP SEFLYEVNKE RVVELESGYE DDADDFDAA
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