Gene Shewana3_4200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_4200 
Symbol 
ID4475871 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008573 
Strand
Start bp62291 
End bp63763 
Gene Length1473 bp 
Protein Length490 aa 
Translation table11 
GC content47% 
IMG OID639720558 
Producthypothetical protein 
Protein accessionYP_863716 
Protein GI117676140 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.590321 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTTGCT CGTTACTTCA CGAGTCGGCC CATCTCAATC ACACCAACTT CAGTGCAATC 
GGAAACGTCA TGCAGCAGAC CAGTACAGCG TTGAAAAACG CAATCAACGT GCTTGAGGAC
ATAAGAATCG ACTTGCGCAA TATCAGGGAA TTTCCTGGCG CAATACAGTC TTATCAATCA
AGCCGAAGAA TATTGGTAGA CATCATTACC AAGCGTGAGT TTACAAACTG TCTCGACGAC
ATTTTGTATT ACGTACTTCT AGTCGGAAAC CTTGAAAACG GGATTACTGC GATCAAACCA
GCATTAGCTG GATTTGATTG GGTAACACTG GAGCTTGATA AGTTGTGTTT GAAATACGCA
CAGCTTGCAC AAACGGCGAA AGACACCTTA GAAGTGCGTG AGTTGGCAGA AAACCTTCTG
TTAGAGCTTG CGGCAATGCA ACAGGCTAAT CAGCAAGAAG CTGAAGGTGA AGCTGAAGGT
GAAGGTGAAG CTGAAGGTGA AGCGGAAGGT GAAGGTGAAG CGGAAGGTGA TGCTGAAGGT
GATGCTGAAG GTGATGCTGA AGGTGAAAGC AACGGCAAGC CAAGCGGTAA GGCTCTTAGC
AATAGCGCAG GGTTCAACGA AATCGATTTG GAGCAACCTT TCGAGGACTT GGACGTAGGC
AAACTGTTAG AGGCTCACCG AGATCAGCAA GATATGAGTA ACTATTCTCG TGTTCCTAAA
CCAATCAAAG TCATTCCTTA CACTGTGCAG GAGTTGTTGC GTGGTAATCC AAACAGTGTT
TTCCCTGCGG CAAATCTGCA GGTGAATGGC GCTGTCACCA ATGCTATTAA GGTCATGTTT
CGACAACGAA ACATGAAATT ATCCGGCGTG ACGCAGTTTG GAGAGTTAGA CGAGGATCGG
TTGGTCGATG CTTATCTGGG TAACCCTGGC GCCAAAAACA TCCGTCGTGA TGTCGCGGCA
AACCTATCTG TAGGTGTGTT GCTTGATGCT TCAGGTTCTA TGGGGTATCC GGATGACGAT
ACACACCGCT CTTGTGTAGC AACAAAAGCG GCAATGGCAA TGACACAGGC TCTTGAAAAA
CAGAGTGGTG TTTTGACGTC ATTATCGCTG TTTGGTGAGT TTTATCTTGA GCTAAAAGGT
TTTGCTCAGA AGAAAACACC TTCGGTCTTG CCCTATTCAG ACCTCGGCGG CACAAGCACT
GGAGCTGCGA TGATGGAAAT GGGCAGCAAG CTCATTTTAC AGTCATCGCA AAAAAAGGTG
ATGTTTGTGA TTACCGATGG TCAACCAGAC TGTCCGCATG AAGTGGTTGG TTCACTCGAT
TGGTTAGCTC AGCATGGCGT TGTGGTTTTG CCTGTCATCA TTGGTCAGGT GGACGTAAGG
TTTACTGGTT TTAAAGACCT GAAAGTAGCC TGTATCGACC ACGTCAACGA GTTACCGAAA
CAGTTAATGC AGTTGCTTAA GCAACACATT TAA
 
Protein sequence
MVCSLLHESA HLNHTNFSAI GNVMQQTSTA LKNAINVLED IRIDLRNIRE FPGAIQSYQS 
SRRILVDIIT KREFTNCLDD ILYYVLLVGN LENGITAIKP ALAGFDWVTL ELDKLCLKYA
QLAQTAKDTL EVRELAENLL LELAAMQQAN QQEAEGEAEG EGEAEGEAEG EGEAEGDAEG
DAEGDAEGES NGKPSGKALS NSAGFNEIDL EQPFEDLDVG KLLEAHRDQQ DMSNYSRVPK
PIKVIPYTVQ ELLRGNPNSV FPAANLQVNG AVTNAIKVMF RQRNMKLSGV TQFGELDEDR
LVDAYLGNPG AKNIRRDVAA NLSVGVLLDA SGSMGYPDDD THRSCVATKA AMAMTQALEK
QSGVLTSLSL FGEFYLELKG FAQKKTPSVL PYSDLGGTST GAAMMEMGSK LILQSSQKKV
MFVITDGQPD CPHEVVGSLD WLAQHGVVVL PVIIGQVDVR FTGFKDLKVA CIDHVNELPK
QLMQLLKQHI