Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_4188 |
Symbol | |
ID | 4475894 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008573 |
Strand | + |
Start bp | 52776 |
End bp | 53429 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 639720546 |
Product | hypothetical protein |
Protein accession | YP_863704 |
Protein GI | 117676128 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.51797 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.519749 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGCGCA TTACAATTCA TCCACTATTT TCCGAATTGG CAGTGGAGTT AGGCTGCAAC AGTGCGCCGA GTCGTTTGGT GTTCTTGGAG GTTCATTTAA GATTGATTGG TCTCGCGCCA GAACAGGTCA ATAAAGAGCA TTTAAAGCAA CTAATTAAGC TCCTATTTGA CGAAGAGATT AACCTGCACC CTCACCATTC AGACTTGGCC TTAGTCTCAA TACCAGGCAT TGCAGAGCCT TACCCAATAC TCACTGCTCG AGGCTACAAC CGGTTGTATA AATCGGATAC AGCTGGGGAA TTCCGCGTCA AAGCCATTTC CAAAGGGGAA GAGTTCACTA CAGCTAACAT TGATGCCATG AGCGAGCCTG AGCAATATAA CGTTGCGCCC AATGCGGAAC TGGAAGGGTT TGCCGCCGTG TACAGTGATA ATAGCAATCT GCTGTTAACG GGGGTTATTT CAGTGGATGA AGTAGAAGAT GTGCTCCACC GATTCCACCG CTGCAGTTTG TCGTTGGCAG AAGTCGGCGC AGGCCTCGCG TTTAATCGCT TATTCAAGGT CAATCGTGCA TTTAAAATGT CACCCGCCAC CAGCGCCTTT GCGGGTTGGT TTTCGATGGC AAGAGCCGCG TTAAAGACCG TTTATTCAAA TTAA
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Protein sequence | MSRITIHPLF SELAVELGCN SAPSRLVFLE VHLRLIGLAP EQVNKEHLKQ LIKLLFDEEI NLHPHHSDLA LVSIPGIAEP YPILTARGYN RLYKSDTAGE FRVKAISKGE EFTTANIDAM SEPEQYNVAP NAELEGFAAV YSDNSNLLLT GVISVDEVED VLHRFHRCSL SLAEVGAGLA FNRLFKVNRA FKMSPATSAF AGWFSMARAA LKTVYSN
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