Gene Shewana3_4188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_4188 
Symbol 
ID4475894 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008573 
Strand
Start bp52776 
End bp53429 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content48% 
IMG OID639720546 
Producthypothetical protein 
Protein accessionYP_863704 
Protein GI117676128 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.51797 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.519749 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCGCA TTACAATTCA TCCACTATTT TCCGAATTGG CAGTGGAGTT AGGCTGCAAC 
AGTGCGCCGA GTCGTTTGGT GTTCTTGGAG GTTCATTTAA GATTGATTGG TCTCGCGCCA
GAACAGGTCA ATAAAGAGCA TTTAAAGCAA CTAATTAAGC TCCTATTTGA CGAAGAGATT
AACCTGCACC CTCACCATTC AGACTTGGCC TTAGTCTCAA TACCAGGCAT TGCAGAGCCT
TACCCAATAC TCACTGCTCG AGGCTACAAC CGGTTGTATA AATCGGATAC AGCTGGGGAA
TTCCGCGTCA AAGCCATTTC CAAAGGGGAA GAGTTCACTA CAGCTAACAT TGATGCCATG
AGCGAGCCTG AGCAATATAA CGTTGCGCCC AATGCGGAAC TGGAAGGGTT TGCCGCCGTG
TACAGTGATA ATAGCAATCT GCTGTTAACG GGGGTTATTT CAGTGGATGA AGTAGAAGAT
GTGCTCCACC GATTCCACCG CTGCAGTTTG TCGTTGGCAG AAGTCGGCGC AGGCCTCGCG
TTTAATCGCT TATTCAAGGT CAATCGTGCA TTTAAAATGT CACCCGCCAC CAGCGCCTTT
GCGGGTTGGT TTTCGATGGC AAGAGCCGCG TTAAAGACCG TTTATTCAAA TTAA
 
Protein sequence
MSRITIHPLF SELAVELGCN SAPSRLVFLE VHLRLIGLAP EQVNKEHLKQ LIKLLFDEEI 
NLHPHHSDLA LVSIPGIAEP YPILTARGYN RLYKSDTAGE FRVKAISKGE EFTTANIDAM
SEPEQYNVAP NAELEGFAAV YSDNSNLLLT GVISVDEVED VLHRFHRCSL SLAEVGAGLA
FNRLFKVNRA FKMSPATSAF AGWFSMARAA LKTVYSN