Gene Shewana3_4187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_4187 
Symbol 
ID4475893 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008573 
Strand
Start bp51874 
End bp52488 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content44% 
IMG OID639720545 
Producthypothetical protein 
Protein accessionYP_863703 
Protein GI117676127 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.227071 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.686605 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACTC AACACAAATT AACAATCGTA GCATTATCTG TTTTAGCTCT GTCTGCTTGC 
AGCTCAAACC CTGTTTCAGA TTATGTTGAA GCACAACAAG AGCTAGTAGA ACAAAAAAAT
GAACAAATGA ACGACGCTAT AGAAAAGGCG CCTGAGTGGT TCTTAAACCC TCCTGCTTCG
AATGGTGATG GTGTTTACGC GACGGCAATG GGCCGTGCTG ATAACTTGAT GGCCGCTCGC
AATATTGCGA ACTTAAATGC GGAATACGCG ATTGCTAAGA CAGTATCGCA GGAAGTTTCT
GGTCGTGAGC GTCAAAACAC TGAAGTGCGC AATGGTCGCA CTAATCAGTT GAATGATGAA
ACAATTGTTA AGCTAGTAAA TCGTGCAAAA GTCGTTGGCT ATAACCACGT TAACACCCAA
GTTCGCGTCG AGAACGGGCT GTACGTAGTG TATATGCTGT TACACCTGCC TTACGACAAG
CTGGAGCGCA TGATTGAACT AAACGATCGC AGCTTTGAAG AGCGCTCTAA AAAGGCTTAT
TCAGAAGTTG AAGCATTAGT GAAACCTTCT CCGACTGTGA GAAATGTAAC AGCTGCGGAA
GTTGTAACCC AATGA
 
Protein sequence
MKTQHKLTIV ALSVLALSAC SSNPVSDYVE AQQELVEQKN EQMNDAIEKA PEWFLNPPAS 
NGDGVYATAM GRADNLMAAR NIANLNAEYA IAKTVSQEVS GRERQNTEVR NGRTNQLNDE
TIVKLVNRAK VVGYNHVNTQ VRVENGLYVV YMLLHLPYDK LERMIELNDR SFEERSKKAY
SEVEALVKPS PTVRNVTAAE VVTQ