Gene Shewana3_4175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_4175 
Symbol 
ID4475916 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008573 
Strand
Start bp41152 
End bp42258 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content47% 
IMG OID639720533 
Producthypothetical protein 
Protein accessionYP_863691 
Protein GI117676115 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.171542 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0532237 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACAAT TGGCAGTGAA ACCGAAGGCA ACTCTTGAGG AAGTGACTAA GCTCGCGAAT 
GAAATGCTTA AAAACGGTGT CGAGCCAACG ACACGTAACT TGAGCGTTCA TCTGCAGGGC
AGAACATCGT CGATCCAAGG GTTCTTGATT GAGTACAAAA ATAATCTTGA GCATAGAAAA
AATGCTATCG CGGAAGAGGT TGGAAGCCTT GCCGTAGCTA AGTTGCTGTC TCAAGAACTG
TTGCTCATGA TTGACCGTCG TAACGAATCG CTGACCGAGC AAGTTGCCCA GTTGACGCGA
AACCTTGATG AAACGCTATC GCTGTTAAGT GACAGTGAAG ATAAGTTAGA AAGCGTCTTG
AATACTACGG CGGCTCAAGT TGCGGAGATT GAAACCAGCA CCGCAGCCAA GGTCGAAAAG
GCCCAATCCG CTGTAAGCCT GATAGAGCAA CAACTGCGAG AGTTAAAGGC CACCAGCGAA
AAGGCCATTG ATGACGCAAG AAATCACGCA AAAGCCGAAG TATTAAAAGC AGAAGCATTA
GTAGACGCAG CGAATGGGCG CGTTGCACAA GCAGAGACCG AATTAAGGGC ATCTCGAGAG
CAAATTAAAT TACTCAGCAT CGATGTTGCG AAGCGTGAAC TAGAACAGCG AGAGTTAGAG
CAAGCGAAGG CCACCATTGC AACTCTGCAG GCCACACTAT CAAAGCAGCA AGACCAGATC
TCATACACCA CAGCGAACCT TGAGCGATTG ACGCAGGACC GAACAGAATT AAAGGCTACA
GAAGCCAAGC TAGGTAAGAC TGCGGAAAAT TTAACGGCAA CCTTAGTATC GGTGCGCAAT
GAATTAGCAG ACTCACGAGC AAAACTAGCC GAGGTTAATG CAGAAAAGTT GGCATTTGAG
CGTGATACGC AAAGACTTAA TACAGATCTC AATAGTTATC GTCAGCAAGC AAACCAACTC
GGAAGCGTCC AAGCTGAGCT TATTAGCGTC GAAAAACAAC TGAATCAGGT GAAATTAGAT
CTATCTCAAT CCGAGCGTGA ACGGGAGATA TTATCCCAAG CTCTAGCTGC CAACCGTGTG
GCGGGCAGTC AGACCGAGAA AAAATAA
 
Protein sequence
MEQLAVKPKA TLEEVTKLAN EMLKNGVEPT TRNLSVHLQG RTSSIQGFLI EYKNNLEHRK 
NAIAEEVGSL AVAKLLSQEL LLMIDRRNES LTEQVAQLTR NLDETLSLLS DSEDKLESVL
NTTAAQVAEI ETSTAAKVEK AQSAVSLIEQ QLRELKATSE KAIDDARNHA KAEVLKAEAL
VDAANGRVAQ AETELRASRE QIKLLSIDVA KRELEQRELE QAKATIATLQ ATLSKQQDQI
SYTTANLERL TQDRTELKAT EAKLGKTAEN LTATLVSVRN ELADSRAKLA EVNAEKLAFE
RDTQRLNTDL NSYRQQANQL GSVQAELISV EKQLNQVKLD LSQSEREREI LSQALAANRV
AGSQTEKK